BLASTX nr result

ID: Cimicifuga21_contig00024194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024194
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328224.1| cc-nbs-lrr resistance protein [Populus trich...   129   3e-28
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   124   1e-26
ref|XP_003635684.1| PREDICTED: putative disease resistance RPP13...   121   5e-26
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   121   7e-26
emb|CBI35644.3| unnamed protein product [Vitis vinifera]              120   1e-25

>ref|XP_002328224.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222837739|gb|EEE76104.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 880

 Score =  129 bits (323), Expect = 3e-28
 Identities = 67/125 (53%), Positives = 90/125 (72%)
 Frame = -1

Query: 376 IPFNLFATLNCLRILDLSITRINELPSSIGNLKHLRYLDLSMTRIKSLHKNLCSLYSLQT 197
           +PF+L   L  LR+L LS   I+ LP+SIG+LKHLR+L+LS + I++L +++CSLY+LQT
Sbjct: 583 VPFDLLPELEFLRVLSLSGYCIDTLPNSIGDLKHLRFLNLSFSAIRNLPQSVCSLYNLQT 642

Query: 196 LKLKGCIELLGLPQGLISLTNLRHLDLQTTPRLTSMPPGIGRLVNLQTLSSFVVGFDTGC 17
           L LKGC  L GLP  L SL NLRHLD+ +   + +MP GI +L NLQTLS FV+G D G 
Sbjct: 643 LLLKGCCLLEGLPSKLGSLINLRHLDITSASSIKAMPMGIEKLTNLQTLSDFVLGKDKGS 702

Query: 16  QIGEL 2
           ++  L
Sbjct: 703 RLSSL 707


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1091

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/122 (53%), Positives = 80/122 (65%)
 Frame = -1

Query: 367 NLFATLNCLRILDLSITRINELPSSIGNLKHLRYLDLSMTRIKSLHKNLCSLYSLQTLKL 188
           +L  TL CLR+LDLS   + E+P  +G LKHLRYL+LS TRIK L  ++C+LY+LQ+L L
Sbjct: 555 DLLPTLRCLRVLDLSHIAVEEIPDMVGRLKHLRYLNLSSTRIKMLPPSVCTLYNLQSLIL 614

Query: 187 KGCIELLGLPQGLISLTNLRHLDLQTTPRLTSMPPGIGRLVNLQTLSSFVVGFDTGCQIG 8
             C  L GLP  +  L NLRHL+L     L  MPP IG L  L+TL  FVV  + GC IG
Sbjct: 615 MNCNNLKGLPNDMKKLLNLRHLNLTGCWHLICMPPQIGELTCLRTLHRFVVAKEKGCGIG 674

Query: 7   EL 2
           EL
Sbjct: 675 EL 676


>ref|XP_003635684.1| PREDICTED: putative disease resistance RPP13-like protein 1-like,
           partial [Vitis vinifera]
          Length = 636

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/114 (56%), Positives = 84/114 (73%)
 Frame = -1

Query: 343 LRILDLSITRINELPSSIGNLKHLRYLDLSMTRIKSLHKNLCSLYSLQTLKLKGCIELLG 164
           LR+L LS   INELP+SIG+LKHLRYL+LS T++K L + + SLY+LQ+L L  C+EL+ 
Sbjct: 347 LRVLSLSGYEINELPNSIGDLKHLRYLNLSHTKLKWLPEAMSSLYNLQSLILCNCMELIK 406

Query: 163 LPQGLISLTNLRHLDLQTTPRLTSMPPGIGRLVNLQTLSSFVVGFDTGCQIGEL 2
           LP  +++LTNLRHLD+  +  L  MPP +G LVNLQTLS F +  D G +I EL
Sbjct: 407 LPICIMNLTNLRHLDISGSTMLEEMPPQVGSLVNLQTLSKFFLSKDNGSRIKEL 460


>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1093

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/125 (51%), Positives = 81/125 (64%)
 Frame = -1

Query: 376 IPFNLFATLNCLRILDLSITRINELPSSIGNLKHLRYLDLSMTRIKSLHKNLCSLYSLQT 197
           +P +L  +L CLR LDL  + I ELP  +GNL+H+R+LDLS T I+ L +++CSLY+LQT
Sbjct: 556 VPHDLILSLRCLRSLDLCYSAIKELPDLMGNLRHIRFLDLSHTSIRVLPESICSLYNLQT 615

Query: 196 LKLKGCIELLGLPQGLISLTNLRHLDLQTTPRLTSMPPGIGRLVNLQTLSSFVVGFDTGC 17
           L L  C  L  LP     L NLRHL+L    +L SMPP IG+L +LQ L   V G   GC
Sbjct: 616 LVLINCKNLHALPGDTNHLVNLRHLNLTGCGQLISMPPDIGKLTSLQRLHRIVAGKGIGC 675

Query: 16  QIGEL 2
            IGEL
Sbjct: 676 GIGEL 680


>emb|CBI35644.3| unnamed protein product [Vitis vinifera]
          Length = 1058

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/114 (56%), Positives = 84/114 (73%)
 Frame = -1

Query: 343 LRILDLSITRINELPSSIGNLKHLRYLDLSMTRIKSLHKNLCSLYSLQTLKLKGCIELLG 164
           LR+L LS   INELP+SIG+LKHLRYL+LS T++K L + + SLY+LQ+L L  C+EL+ 
Sbjct: 389 LRVLSLSGYEINELPNSIGDLKHLRYLNLSHTKLKWLPEAVSSLYNLQSLILCNCMELIK 448

Query: 163 LPQGLISLTNLRHLDLQTTPRLTSMPPGIGRLVNLQTLSSFVVGFDTGCQIGEL 2
           LP  +++LTNLRHLD+  +  L  MPP +G LVNLQTLS F +  D G +I EL
Sbjct: 449 LPICIMNLTNLRHLDISGSIMLEEMPPQVGSLVNLQTLSKFFLSKDNGSRIKEL 502


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