BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024188
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_002313163.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_002518652.1| pentatricopeptide repeat-containing protein,...   142   2e-32
ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32

>ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/90 (72%), Positives = 80/90 (88%)
 Frame = -3

Query: 270 KENRVSDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLI 91
           KE R S AASLLH+L +DG+ +D+YAYTS+ITA+A+NGRYREAV+VFKK+EEEGC+PTLI
Sbjct: 197 KEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLI 256

Query: 90  TYNVILNVYGKMGMPWNKILAIVNGMRKQG 1
           TYNVILNVYGKMGMPW+KI  +V+ M+  G
Sbjct: 257 TYNVILNVYGKMGMPWSKIAGLVDSMKSSG 286



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = -3

Query: 255 SDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLITYNVI 76
           S  A L+ ++ S G+  D+Y Y ++I++      Y EA  VF++M+  G  P  +TYN +
Sbjct: 273 SKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNAL 332

Query: 75  LNVYGKMGMPWNKILAIVNGMRKQG 1
           L+VYGK   P  + + ++  M   G
Sbjct: 333 LDVYGKSRRP-REAMEVLKEMEASG 356


>ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/90 (72%), Positives = 80/90 (88%)
 Frame = -3

Query: 270 KENRVSDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLI 91
           KE R S AASLLH+L +DG+ +D+YAYTS+ITA+A+NGRYREAV+VFKK+EEEGC+PTLI
Sbjct: 197 KEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLI 256

Query: 90  TYNVILNVYGKMGMPWNKILAIVNGMRKQG 1
           TYNVILNVYGKMGMPW+KI  +V+ M+  G
Sbjct: 257 TYNVILNVYGKMGMPWSKIAGLVDSMKSSG 286



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = -3

Query: 255 SDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLITYNVI 76
           S  A L+ ++ S G+  D+Y Y ++I++      Y EA  VF++M+  G  P  +TYN +
Sbjct: 273 SKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNAL 332

Query: 75  LNVYGKMGMPWNKILAIVNGMRKQG 1
           L+VYGK   P  + + ++  M   G
Sbjct: 333 LDVYGKSRRP-REAMEVLKEMEASG 356


>ref|XP_002313163.1| predicted protein [Populus trichocarpa] gi|222849571|gb|EEE87118.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/90 (75%), Positives = 76/90 (84%)
 Frame = -3

Query: 270 KENRVSDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLI 91
           KE +VS AASLL+NLH DG   DVYAYTS+ITA  +NGRYREAV+VFKKMEEEGC+PTLI
Sbjct: 10  KEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLI 69

Query: 90  TYNVILNVYGKMGMPWNKILAIVNGMRKQG 1
           TYNVILNVYGKMGMPWNKI  +  GM+  G
Sbjct: 70  TYNVILNVYGKMGMPWNKITGLFEGMKNAG 99



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 22/73 (30%), Positives = 44/73 (60%)
 Frame = -3

Query: 270 KENRVSDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLI 91
           ++  + +A  L + +   GI +DV+ YT+M++ F   G+   A+ VF++M   GC+P + 
Sbjct: 186 RDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNIC 245

Query: 90  TYNVILNVYGKMG 52
           T+N ++ ++G  G
Sbjct: 246 TFNALIKMHGNRG 258



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/84 (28%), Positives = 51/84 (60%)
 Frame = -3

Query: 252 DAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLITYNVIL 73
           +AA++  ++ S G V D   Y +++  +  + R +EA+ V ++ME  GC P+++TYN ++
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181

Query: 72  NVYGKMGMPWNKILAIVNGMRKQG 1
           + Y + G+   + + + N M ++G
Sbjct: 182 SAYARDGL-LEEAMELKNQMVERG 204


>ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542033|gb|EEF43577.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 827

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/90 (73%), Positives = 80/90 (88%)
 Frame = -3

Query: 270 KENRVSDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLI 91
           KE +VS A+S+L+NL  DG  +DVYAYTS+ITA+A+NGRYR+AVLVFKKMEEEGC+PTLI
Sbjct: 194 KEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLI 253

Query: 90  TYNVILNVYGKMGMPWNKILAIVNGMRKQG 1
           TYNVILNVYGKMGMPW+KI  +V+GM+  G
Sbjct: 254 TYNVILNVYGKMGMPWSKISGLVHGMKSSG 283



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/70 (35%), Positives = 39/70 (55%)
 Frame = -3

Query: 255 SDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLITYNVI 76
           S  + L+H + S G+  D Y Y ++I+       Y EA  VF++M+  G  P  +T+N +
Sbjct: 270 SKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTL 329

Query: 75  LNVYGKMGMP 46
           L+VYGK   P
Sbjct: 330 LDVYGKSRRP 339


>ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/90 (76%), Positives = 77/90 (85%)
 Frame = -3

Query: 270 KENRVSDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLI 91
           K  RVS AASLLHNL  DG  VDVYAYTSMITAF +NGRYREAV+VFKKMEE GC+PTLI
Sbjct: 177 KGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLI 236

Query: 90  TYNVILNVYGKMGMPWNKILAIVNGMRKQG 1
           TYNVILNVYGKMGMPWNK++ +V+ M+  G
Sbjct: 237 TYNVILNVYGKMGMPWNKMVGLVDRMKSAG 266



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/73 (31%), Positives = 45/73 (61%)
 Frame = -3

Query: 270 KENRVSDAASLLHNLHSDGIVVDVYAYTSMITAFANNGRYREAVLVFKKMEEEGCQPTLI 91
           ++  + DA  L + +   GI  DV+ YT++++ F   G+ + AV +F++M  EGC+P + 
Sbjct: 353 RDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNIC 412

Query: 90  TYNVILNVYGKMG 52
           T+N ++ ++G  G
Sbjct: 413 TFNALIKMHGNRG 425