BLASTX nr result

ID: Cimicifuga21_contig00024156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024156
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637513.1| Retinol dehydrogenase [Medicago truncatula] ...   169   2e-40
ref|XP_003637512.1| Retinol dehydrogenase [Medicago truncatula] ...   169   2e-40
ref|XP_002309049.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_002273550.1| PREDICTED: short-chain dehydrogenase TIC 32,...   168   5e-40
ref|XP_003542461.1| PREDICTED: retinol dehydrogenase 12-like iso...   165   3e-39

>ref|XP_003637513.1| Retinol dehydrogenase [Medicago truncatula]
           gi|355503448|gb|AES84651.1| Retinol dehydrogenase
           [Medicago truncatula]
          Length = 256

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/99 (80%), Positives = 91/99 (91%)
 Frame = +1

Query: 1   MFCPYQLSEDGIETQFATNHLGHFYLTNLLLDKMKNTSRVTGMEGRIVNLSSIAHTHTYD 180
           MFCP+QL++DGIE QFATNHLGHF LTNLLL+KMK T++ TG+EGRI+NLSSIAHT+TY+
Sbjct: 57  MFCPFQLTQDGIEMQFATNHLGHFLLTNLLLEKMKQTAKATGIEGRIINLSSIAHTYTYE 116

Query: 181 EGIRFELINDYKGYSDKKAYGQSKLANILHANELSRRLK 297
           EGIR + IND  GYSDKKAYGQSKLANILHANELSRRLK
Sbjct: 117 EGIRLDNINDQIGYSDKKAYGQSKLANILHANELSRRLK 155


>ref|XP_003637512.1| Retinol dehydrogenase [Medicago truncatula]
           gi|355503447|gb|AES84650.1| Retinol dehydrogenase
           [Medicago truncatula]
          Length = 323

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/99 (80%), Positives = 91/99 (91%)
 Frame = +1

Query: 1   MFCPYQLSEDGIETQFATNHLGHFYLTNLLLDKMKNTSRVTGMEGRIVNLSSIAHTHTYD 180
           MFCP+QL++DGIE QFATNHLGHF LTNLLL+KMK T++ TG+EGRI+NLSSIAHT+TY+
Sbjct: 124 MFCPFQLTQDGIEMQFATNHLGHFLLTNLLLEKMKQTAKATGIEGRIINLSSIAHTYTYE 183

Query: 181 EGIRFELINDYKGYSDKKAYGQSKLANILHANELSRRLK 297
           EGIR + IND  GYSDKKAYGQSKLANILHANELSRRLK
Sbjct: 184 EGIRLDNINDQIGYSDKKAYGQSKLANILHANELSRRLK 222


>ref|XP_002309049.1| predicted protein [Populus trichocarpa] gi|222855025|gb|EEE92572.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  168 bits (425), Expect = 5e-40
 Identities = 81/99 (81%), Positives = 87/99 (87%)
 Frame = +1

Query: 1   MFCPYQLSEDGIETQFATNHLGHFYLTNLLLDKMKNTSRVTGMEGRIVNLSSIAHTHTYD 180
           MFCPYQLSEDGIE QFATNHLGHF LTNLLLDKMK T+R TG+EGRIVNLSS+AH HTY 
Sbjct: 123 MFCPYQLSEDGIEMQFATNHLGHFLLTNLLLDKMKETARTTGVEGRIVNLSSVAHIHTYK 182

Query: 181 EGIRFELINDYKGYSDKKAYGQSKLANILHANELSRRLK 297
           +GIRF  IND K YSDK+AYGQSKLANILHA ELSRR +
Sbjct: 183 DGIRFNNINDKKRYSDKRAYGQSKLANILHAKELSRRFQ 221


>ref|XP_002273550.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
           vinifera] gi|297741471|emb|CBI32603.3| unnamed protein
           product [Vitis vinifera]
          Length = 324

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/99 (79%), Positives = 91/99 (91%)
 Frame = +1

Query: 1   MFCPYQLSEDGIETQFATNHLGHFYLTNLLLDKMKNTSRVTGMEGRIVNLSSIAHTHTYD 180
           MFCP+QLS+DGIE+QFATNH+GHF LTNLLLDKMK+T+R TG+EGRIVNLSSIAH HTY+
Sbjct: 123 MFCPFQLSQDGIESQFATNHIGHFLLTNLLLDKMKSTARTTGIEGRIVNLSSIAHLHTYE 182

Query: 181 EGIRFELINDYKGYSDKKAYGQSKLANILHANELSRRLK 297
            GI+F+ IND K YSDK+AYGQSKLANILHA ELSRRL+
Sbjct: 183 NGIKFDGINDEKSYSDKRAYGQSKLANILHAKELSRRLQ 221


>ref|XP_003542461.1| PREDICTED: retinol dehydrogenase 12-like isoform 1 [Glycine max]
          Length = 323

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/99 (79%), Positives = 88/99 (88%)
 Frame = +1

Query: 1   MFCPYQLSEDGIETQFATNHLGHFYLTNLLLDKMKNTSRVTGMEGRIVNLSSIAHTHTYD 180
           MFCPYQ +EDGIE QFATNHLGHF LT LLLDKMK T++ TG+EGRI+NLSSIAH +TY+
Sbjct: 124 MFCPYQQTEDGIEMQFATNHLGHFLLTKLLLDKMKQTAKDTGIEGRIINLSSIAHVYTYE 183

Query: 181 EGIRFELINDYKGYSDKKAYGQSKLANILHANELSRRLK 297
           EGIRF+ IND  GYSDKKAYGQSKLANILH NELSRRL+
Sbjct: 184 EGIRFDNINDEDGYSDKKAYGQSKLANILHTNELSRRLQ 222


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