BLASTX nr result

ID: Cimicifuga21_contig00024136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024136
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319909.1| AP2/ERF domain-containing transcription fact...    72   6e-11
ref|XP_002329370.1| AP2/ERF domain-containing transcription fact...    68   9e-10
ref|XP_002267468.1| PREDICTED: ethylene-responsive transcription...    64   1e-08
ref|XP_002517949.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_004140031.1| PREDICTED: LOW QUALITY PROTEIN: ethylene-res...    55   5e-06

>ref|XP_002319909.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372108|gb|ABQ62985.1| RAP2-like
           protein [Populus trichocarpa]
           gi|222858285|gb|EEE95832.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 469

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
 Frame = +2

Query: 2   QPYQSQQVSNLPSQYME--IMPTPQDSPNDDLDKPNSQGNSSSGLDLSEVTVSNEAQELT 175
           +P Q+Q+  NL ++ M   I+P PQ  P      P    +  SG+  S  TVS+E Q + 
Sbjct: 317 KPKQAQEGLNLQAETMSPPILP-PQPPPEQP---PGDHPDDDSGMGSSGATVSDEIQAVA 372

Query: 176 TTSIQSEGLSVSPEFVWDDLDEAWFNSIPSGWDPTSPVW 292
             S   EG+S S E  W D+ EAW+N+I +GW P SPVW
Sbjct: 373 EGSSAGEGISGSQELEWGDMAEAWYNAIQAGWGPGSPVW 411


>ref|XP_002329370.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222870420|gb|EEF07551.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 464

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/96 (39%), Positives = 52/96 (54%)
 Frame = +2

Query: 5   PYQSQQVSNLPSQYMEIMPTPQDSPNDDLDKPNSQGNSSSGLDLSEVTVSNEAQELTTTS 184
           P Q+Q+  NL  + M   P P+    D  D         SGL  S  TVS+E Q + +++
Sbjct: 318 PKQAQEGINLQVETMPPPPPPEQPQGDHPD-------DDSGLGSSGATVSDEVQAVGSSA 370

Query: 185 IQSEGLSVSPEFVWDDLDEAWFNSIPSGWDPTSPVW 292
              EG S S E +W D+ EAW+N+I +GW P SPVW
Sbjct: 371 --GEGTSGSQELMWGDMAEAWYNAIQAGWGPGSPVW 404


>ref|XP_002267468.1| PREDICTED: ethylene-responsive transcription factor ERF054-like
           [Vitis vinifera]
          Length = 465

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   QPYQSQQVSNLPSQYMEIMPTPQDSPNDDLDKPNSQGNSSSGLDLSEVTVSNEAQELTTT 181
           QP Q+ +  NL    + ++P P  SP  D        N+  GL L     +    E+  +
Sbjct: 311 QPQQAPEGLNLQDSEVGMLPPPAPSPGYD-------SNNELGLVLGSSEAAARNDEVQKS 363

Query: 182 SIQSEGLSVSP-EFVWDDLDEAWFNSIPSGWDPTSPVW 292
           S   E +S SP E VW ++ EAWFN+IP+GW P S VW
Sbjct: 364 SNAGESVSESPPESVWGEMAEAWFNAIPAGWGPGSAVW 401


>ref|XP_002517949.1| conserved hypothetical protein [Ricinus communis]
           gi|223542931|gb|EEF44467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 426

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/81 (48%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
 Frame = +2

Query: 59  PTPQDSPNDDLDKPNSQGNSSSGLDLSEVTVSNEAQELTTTSI--QSEGLSVSPEFVWDD 232
           P PQ S  D+ D  N  G  SSG      TVS+E Q +   S   + EG+S S E VW D
Sbjct: 305 PPPQQSQGDNPD--NDSGMGSSG-----ATVSDEVQPVVEGSDTGRGEGVSGSQELVWGD 357

Query: 233 L-DEAWFNSIPSGWDPTSPVW 292
           +  EAWFNSI +GW P SPVW
Sbjct: 358 MMTEAWFNSISAGWGPGSPVW 378


>ref|XP_004140031.1| PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription
           factor ERF054-like [Cucumis sativus]
          Length = 386

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/73 (35%), Positives = 39/73 (53%)
 Frame = +2

Query: 74  SPNDDLDKPNSQGNSSSGLDLSEVTVSNEAQELTTTSIQSEGLSVSPEFVWDDLDEAWFN 253
           +P  D+D  N   +     +   VT  N  +E      + EG+S + E VW ++ EAW N
Sbjct: 267 APQQDVDNNNHDNDIELESNNEGVTEENRQEEEEXR--REEGISKTQEMVWREMAEAWLN 324

Query: 254 SIPSGWDPTSPVW 292
           ++P+GW P SPVW
Sbjct: 325 AMPAGWGPGSPVW 337


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