BLASTX nr result

ID: Cimicifuga21_contig00024125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024125
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
emb|CBI21495.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268...   119   3e-25
ref|XP_002864933.1| hypothetical protein ARALYDRAFT_919822 [Arab...   108   5e-22
gb|AAM62516.1| unknown [Arabidopsis thaliana]                         105   4e-21

>ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis]
           gi|223527293|gb|EEF29446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/116 (56%), Positives = 85/116 (73%), Gaps = 2/116 (1%)
 Frame = +3

Query: 6   GSDLGFFISKNTALLTDSLDRKLIPNSEILKNILSDDR--KALIRVLQKCKWLLSRDPKS 179
           G DLG FISKN+ LLT SLD+KL P  EILK +L +D   K L++VL +C W++S++PKS
Sbjct: 103 GYDLGKFISKNSTLLTASLDKKLSPRVEILKRLLLNDENNKDLVKVLTRCNWIISKNPKS 162

Query: 180 ILLPNLSLLRRYGIVGSQLSMLLKLQPTLFVTNESNLRNFLRKVEEMGFSSDSRML 347
            LL N++ L   GIVGSQLSMLL+ QP LF+  ES LR+ + +V  MGFS +SRML
Sbjct: 163 RLLSNVAFLESCGIVGSQLSMLLRRQPRLFIMQESALRDLVSQVLNMGFSVNSRML 218


>emb|CBI21495.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  119 bits (298), Expect = 3e-25
 Identities = 65/116 (56%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
 Frame = +3

Query: 6   GSDLGFFISKNTALLTDSLDRKLIPNSEILKNILSDDRKA--LIRVLQKCKWLLSRDPKS 179
           G+DLG FISKN+ +LT SL++KL+P  EILK  LSDD     LIRVL++C W+LSR+P+ 
Sbjct: 110 GADLGKFISKNSKVLTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPE- 168

Query: 180 ILLPNLSLLRRYGIVGSQLSMLLKLQPTLFVTNESNLRNFLRKVEEMGFSSDSRML 347
           +LL N++ L   GIVGSQLSMLL  QP LFV  +S L++ + +  +MGFS +SRML
Sbjct: 169 LLLSNIAFLESCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRML 224


>ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera]
          Length = 388

 Score =  119 bits (298), Expect = 3e-25
 Identities = 65/116 (56%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
 Frame = +3

Query: 6   GSDLGFFISKNTALLTDSLDRKLIPNSEILKNILSDDRKA--LIRVLQKCKWLLSRDPKS 179
           G+DLG FISKN+ +LT SL++KL+P  EILK  LSDD     LIRVL++C W+LSR+P+ 
Sbjct: 129 GADLGKFISKNSKVLTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPE- 187

Query: 180 ILLPNLSLLRRYGIVGSQLSMLLKLQPTLFVTNESNLRNFLRKVEEMGFSSDSRML 347
           +LL N++ L   GIVGSQLSMLL  QP LFV  +S L++ + +  +MGFS +SRML
Sbjct: 188 LLLSNIAFLESCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRML 243


>ref|XP_002864933.1| hypothetical protein ARALYDRAFT_919822 [Arabidopsis lyrata subsp.
           lyrata] gi|297310768|gb|EFH41192.1| hypothetical protein
           ARALYDRAFT_919822 [Arabidopsis lyrata subsp. lyrata]
          Length = 382

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/115 (47%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   TGSDLGFFISKNTALLTDSLDRKLIPNSEILKNILSDDRKALIRVLQKCKWLLSRDPKSI 182
           +GSDLG F+S++++ +  SL RK+IP  EILK+I++   + L  +L +C WLL RDP   
Sbjct: 120 SGSDLGKFVSQHSSGIGISLVRKMIPTVEILKSIVAPKHEHLTVILSRCGWLLGRDPNLF 179

Query: 183 LLPNLSLLRRYGIVGSQLSMLLKLQPTLFVTNESNLRNFLRKVEEMGFSSDSRML 347
           LLPN+S L+  GIVGSQL+ LL+ QP +F   E  LR ++ +  E+GF+ +SRML
Sbjct: 180 LLPNISYLKTCGIVGSQLASLLRRQPRIFNVPEEKLRGYVSRALELGFNLNSRML 234


>gb|AAM62516.1| unknown [Arabidopsis thaliana]
          Length = 391

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/116 (48%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   TGSDLGFFISKNTALLTDSLDRKLIPNSEILKNILSDDRKALIRVLQKCKWLL-SRDPKS 179
           TGS LG F+S+N++++  SL +KLIP  EILK+I++   + L  +L +C WLL SRDP  
Sbjct: 120 TGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNL 179

Query: 180 ILLPNLSLLRRYGIVGSQLSMLLKLQPTLFVTNESNLRNFLRKVEEMGFSSDSRML 347
            LLPN+S L   GIVGSQL+ LL+ QP +F  +E  LR ++ +  ++GF+ +SRML
Sbjct: 180 FLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRML 235


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