BLASTX nr result
ID: Cimicifuga21_contig00024118
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00024118
(1663 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18893.3| unnamed protein product [Vitis vinifera] 555 e-155
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth... 555 e-155
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm... 516 e-144
ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|2... 502 e-139
ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synth... 498 e-138
>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 555 bits (1429), Expect = e-155
Identities = 282/421 (66%), Positives = 334/421 (79%), Gaps = 7/421 (1%)
Frame = +1
Query: 16 SIAETVKRDGHEINSFTLEISVPPIILANERDMWLYLKRKYGSELWFQEKLLTEHISVKD 195
SIA VK++GHE ++F+LE+S+PP+I NE + LY+K+KYGSELWFQEK L+E IS KD
Sbjct: 168 SIANLVKKEGHEFDNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQEKFLSERISAKD 227
Query: 196 ALKFSISSSLETLLDAKN-GVSSFHICLTYTQTKASMELPDTQGRDQDCKRRKTGAQG-- 366
ALK S+ + LE LLD K+ G S+F I LTY Q +AS + + R Q CKRR+TG +
Sbjct: 228 ALKLSLCNPLEKLLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIF 287
Query: 367 -SLNIAAVRGVESADHANGVVGAIIDKSLNGLQDSEH---FKSPPEKAKDPCCLTCHCYR 534
+++ + V G+E +D + A I K +GLQD+E+ FK P EK PC L CYR
Sbjct: 288 STVHGSVVDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYR 347
Query: 535 TPIYISGRYLKYSRNVSQTRWIIDDERKGEASVEEIIGNVMLPVCRGDNYKFHAAGREDI 714
T IYI GRYLKYSRNVSQTRWIIDDER GEASVEEIIG +LP+C GDNYKFHAAGREDI
Sbjct: 348 THIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDI 407
Query: 715 DVRMLGSGRPFLIEVQNARNDPSKVSMAEIEEKINNSEVKLVRVRNVKEVGIEGWNLMRE 894
+VRMLGSGRPFL+E+QN+R+ PS+ + EIE KINN E KLVRV+N+K V GW+LM+E
Sbjct: 408 NVRMLGSGRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQE 467
Query: 895 GETEKQKQYAALVWISRSLKDEDLQIISSLKDMPISQRTPVRVLHRRSPLDRERIIHWMK 1074
GE EKQKQYAALVWI R LKDED+Q ISSLKD I QRTP+RVLHRRSPL+RE+IIHWMK
Sbjct: 468 GEEEKQKQYAALVWIDRPLKDEDMQAISSLKDKKILQRTPIRVLHRRSPLEREKIIHWMK 527
Query: 1075 VEKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTKPSIGSILGCRAEILQLDVTDVKMDC 1254
+EKI GS+QYFLLHLCTQAGTYIKEFVHGDLGRT PS+GSILGCRAEILQLDVT+VKMDC
Sbjct: 528 IEKIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTEVKMDC 587
Query: 1255 F 1257
F
Sbjct: 588 F 588
>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
vinifera]
Length = 578
Score = 555 bits (1429), Expect = e-155
Identities = 282/421 (66%), Positives = 334/421 (79%), Gaps = 7/421 (1%)
Frame = +1
Query: 16 SIAETVKRDGHEINSFTLEISVPPIILANERDMWLYLKRKYGSELWFQEKLLTEHISVKD 195
SIA VK++GHE ++F+LE+S+PP+I NE + LY+K+KYGSELWFQEK L+E IS KD
Sbjct: 155 SIANLVKKEGHEFDNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQEKFLSERISAKD 214
Query: 196 ALKFSISSSLETLLDAKN-GVSSFHICLTYTQTKASMELPDTQGRDQDCKRRKTGAQG-- 366
ALK S+ + LE LLD K+ G S+F I LTY Q +AS + + R Q CKRR+TG +
Sbjct: 215 ALKLSLCNPLEKLLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIF 274
Query: 367 -SLNIAAVRGVESADHANGVVGAIIDKSLNGLQDSEH---FKSPPEKAKDPCCLTCHCYR 534
+++ + V G+E +D + A I K +GLQD+E+ FK P EK PC L CYR
Sbjct: 275 STVHGSVVDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYR 334
Query: 535 TPIYISGRYLKYSRNVSQTRWIIDDERKGEASVEEIIGNVMLPVCRGDNYKFHAAGREDI 714
T IYI GRYLKYSRNVSQTRWIIDDER GEASVEEIIG +LP+C GDNYKFHAAGREDI
Sbjct: 335 THIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDI 394
Query: 715 DVRMLGSGRPFLIEVQNARNDPSKVSMAEIEEKINNSEVKLVRVRNVKEVGIEGWNLMRE 894
+VRMLGSGRPFL+E+QN+R+ PS+ + EIE KINN E KLVRV+N+K V GW+LM+E
Sbjct: 395 NVRMLGSGRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQE 454
Query: 895 GETEKQKQYAALVWISRSLKDEDLQIISSLKDMPISQRTPVRVLHRRSPLDRERIIHWMK 1074
GE EKQKQYAALVWI R LKDED+Q ISSLKD I QRTP+RVLHRRSPL+RE+IIHWMK
Sbjct: 455 GEEEKQKQYAALVWIDRPLKDEDMQAISSLKDKKILQRTPIRVLHRRSPLEREKIIHWMK 514
Query: 1075 VEKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTKPSIGSILGCRAEILQLDVTDVKMDC 1254
+EKI GS+QYFLLHLCTQAGTYIKEFVHGDLGRT PS+GSILGCRAEILQLDVT+VKMDC
Sbjct: 515 IEKIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTEVKMDC 574
Query: 1255 F 1257
F
Sbjct: 575 F 575
>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
gi|223551325|gb|EEF52811.1| conserved hypothetical
protein [Ricinus communis]
Length = 565
Score = 516 bits (1328), Expect = e-144
Identities = 269/422 (63%), Positives = 323/422 (76%), Gaps = 8/422 (1%)
Frame = +1
Query: 16 SIAETVKRDGHEINSFTLEISVPPIILANERDMWLYLKRKYGSELWFQEKLLTEHISVKD 195
SIAE +K++GH+I+SF+LE+S+ PII NER + LY++RKY SELWFQE + ++ I K+
Sbjct: 144 SIAELIKQEGHQIDSFSLEVSIAPIIQENERVIRLYMERKYRSELWFQESV-SKCICTKE 202
Query: 196 ALKFSISSSLETLLDAKNGVSSFHICLTYTQTKASMELPDTQGRDQDCKRRKTG---AQG 366
ALKF+I++ LE +LD K+G SS I LTYTQ K S P++ + CKRRKTG A
Sbjct: 203 ALKFAIANPLERMLDVKSGPSSCRIRLTYTQAKPSGIAPNSVPGGEGCKRRKTGITDAPE 262
Query: 367 SLN---IAAVRGVESADHANGVVGAIIDKSLNGLQDSEHFKS--PPEKAKDPCCLTCHCY 531
S+N I A G + G+ + + S GL++ E + P EK K+PC L CY
Sbjct: 263 SVNNELINARNGCFDSSMYKGIDSS--ESSFCGLENHESSECIFPKEKVKEPCNLLFLCY 320
Query: 532 RTPIYISGRYLKYSRNVSQTRWIIDDERKGEASVEEIIGNVMLPVCRGDNYKFHAAGRED 711
RTPIY GRYLK+SRNVSQTRWIIDDER GEAS+EEIIG + P+C+GD+YKFHAAGRED
Sbjct: 321 RTPIYFGGRYLKFSRNVSQTRWIIDDERMGEASIEEIIGGSIFPMCQGDSYKFHAAGRED 380
Query: 712 IDVRMLGSGRPFLIEVQNARNDPSKVSMAEIEEKINNSEVKLVRVRNVKEVGIEGWNLMR 891
IDVRMLGSGRPFL+E+QN R PS+ + EIE KINN KLV VR++K V W LM
Sbjct: 381 IDVRMLGSGRPFLVEIQNPRQLPSETLVEEIETKINNMHDKLVGVRHLKMVSNHSWTLMH 440
Query: 892 EGETEKQKQYAALVWISRSLKDEDLQIISSLKDMPISQRTPVRVLHRRSPLDRERIIHWM 1071
EGE EKQKQY ALVWISR L+D+DLQ I+SLKDM I QRTPVRVLHRRSPL+R++IIHWM
Sbjct: 441 EGEAEKQKQYCALVWISRPLEDQDLQSIASLKDMQILQRTPVRVLHRRSPLERQKIIHWM 500
Query: 1072 KVEKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTKPSIGSILGCRAEILQLDVTDVKMD 1251
K+E++ GS QYFLLHLCTQAGTYIKEFVHGDLGRT PSIGSILGCRAEILQLDVT+VKMD
Sbjct: 501 KIERLTGSCQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTEVKMD 560
Query: 1252 CF 1257
CF
Sbjct: 561 CF 562
>ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|222857212|gb|EEE94759.1|
predicted protein [Populus trichocarpa]
Length = 520
Score = 502 bits (1292), Expect = e-139
Identities = 264/425 (62%), Positives = 316/425 (74%), Gaps = 7/425 (1%)
Frame = +1
Query: 4 DFTSSIAETVKRDGHEINSFTLEISVPPIILANERDMWLYLKRKYGSELWFQEKLLTEHI 183
+ +SIAE +++GH+I+ F+LE+S+PPII NE+ + LY+K+KYGSELWFQE+L +E I
Sbjct: 101 ELAASIAELTRQEGHQIDGFSLEVSIPPIIFENEQAVRLYMKKKYGSELWFQERL-SECI 159
Query: 184 SVKDALKFSISSSLETLLDAKNGVSSFHICLTYTQTKASMELPDTQGRDQDCKRRKTGAQ 363
S KDALKF+I + LE +LD K+G S I LTYT+TK S+ + D R G
Sbjct: 160 STKDALKFAIVNPLEIILDVKSGPSYVRIRLTYTETKPSI----IPSKSVD---RNGGTN 212
Query: 364 GSLNIAAVR----GVESADHANGVVGAIIDKSLNGL---QDSEHFKSPPEKAKDPCCLTC 522
L+ V G D + G +S GL + SE P E+ +PC L
Sbjct: 213 NGLDTVHVELVGNGTGCCDLSLGQGSPASGRSSTGLAEHESSECSNFPLERVNEPCHLVF 272
Query: 523 HCYRTPIYISGRYLKYSRNVSQTRWIIDDERKGEASVEEIIGNVMLPVCRGDNYKFHAAG 702
CYRTPIY GRYLK+SRNVSQTRWIIDDER GEAS+EEIIG +LP+C+GD+YKFHAAG
Sbjct: 273 LCYRTPIYFGGRYLKFSRNVSQTRWIIDDERMGEASIEEIIGGNILPMCQGDSYKFHAAG 332
Query: 703 REDIDVRMLGSGRPFLIEVQNARNDPSKVSMAEIEEKINNSEVKLVRVRNVKEVGIEGWN 882
REDIDVRMLGSGRPFL+EVQNAR PS+ + EIE ++NN KLV V+N+ V W+
Sbjct: 333 REDIDVRMLGSGRPFLVEVQNAREVPSEALVKEIETRMNNLGNKLVGVKNLSLVTSHSWD 392
Query: 883 LMREGETEKQKQYAALVWISRSLKDEDLQIISSLKDMPISQRTPVRVLHRRSPLDRERII 1062
LMREGE EKQKQY+ALVWISR L+DEDLQ I+S KD+ I QRTPVRVLHRRSPL+R +II
Sbjct: 393 LMREGEAEKQKQYSALVWISRPLEDEDLQCIASHKDLQILQRTPVRVLHRRSPLERGKII 452
Query: 1063 HWMKVEKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTKPSIGSILGCRAEILQLDVTDV 1242
HWMK+E+I GS+QYFLLHLCTQAGTYIKEFVHGDLGRT PSIGSIL CRAEILQLDVTDV
Sbjct: 453 HWMKIEQITGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILRCRAEILQLDVTDV 512
Query: 1243 KMDCF 1257
KMDCF
Sbjct: 513 KMDCF 517
>ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Glycine
max]
Length = 484
Score = 498 bits (1282), Expect = e-138
Identities = 255/413 (61%), Positives = 304/413 (73%)
Frame = +1
Query: 19 IAETVKRDGHEINSFTLEISVPPIILANERDMWLYLKRKYGSELWFQEKLLTEHISVKDA 198
IA+ VKR ++ ++F+LE+S+PPII+ + + Y+K KYGS+ WFQE L + IS KDA
Sbjct: 90 IADMVKRQAYQFDTFSLEVSIPPIIIDDVNFLCSYMKTKYGSQPWFQENLHSGCISTKDA 149
Query: 199 LKFSISSSLETLLDAKNGVSSFHICLTYTQTKASMELPDTQGRDQDCKRRKTGAQGSLNI 378
LKFS+ L+ LL+ K+ + F I LTYT TK + + D + CKRRK G
Sbjct: 150 LKFSLIYPLQNLLECKSNMGPFRIRLTYTHTKGNDKSSDCAA--ETCKRRKIGEPS---- 203
Query: 379 AAVRGVESADHANGVVGAIIDKSLNGLQDSEHFKSPPEKAKDPCCLTCHCYRTPIYISGR 558
+VG S S+ K EKA +PC T CYRTP Y GR
Sbjct: 204 --------------IVGERSFSSTLENDSSDCCKFLLEKANEPCHFTYSCYRTPFYFGGR 249
Query: 559 YLKYSRNVSQTRWIIDDERKGEASVEEIIGNVMLPVCRGDNYKFHAAGREDIDVRMLGSG 738
YLKYSRNVSQTRWIIDDER GEASVEEIIG +L C+GD++KFHAAGREDIDVRMLG G
Sbjct: 250 YLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQACQGDSFKFHAAGREDIDVRMLGPG 309
Query: 739 RPFLIEVQNARNDPSKVSMAEIEEKINNSEVKLVRVRNVKEVGIEGWNLMREGETEKQKQ 918
RPFL+EVQN R+ PS++ + +IE+ IN E KLVRV+N+K VG +GWNLMREGE EKQKQ
Sbjct: 310 RPFLVEVQNGRHIPSELFVKDIEKTINKMENKLVRVKNLKLVGSDGWNLMREGEAEKQKQ 369
Query: 919 YAALVWISRSLKDEDLQIISSLKDMPISQRTPVRVLHRRSPLDRERIIHWMKVEKIVGST 1098
YAALVWISR LKDED+Q +SSLKD+ + QRTP+RVLHRRSPL+RE+IIHWMK E I GS+
Sbjct: 370 YAALVWISRPLKDEDIQCVSSLKDLKVLQRTPIRVLHRRSPLEREKIIHWMKTETIAGSS 429
Query: 1099 QYFLLHLCTQAGTYIKEFVHGDLGRTKPSIGSILGCRAEILQLDVTDVKMDCF 1257
QYFLLHLCTQAGTYIKEFVHGDLGRT PSIGSILGCRAEILQLDVTD+KM+CF
Sbjct: 430 QYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTDIKMECF 482