BLASTX nr result

ID: Cimicifuga21_contig00024115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024115
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538198.1| PREDICTED: SNF1-related protein kinase regul...   186   2e-45
gb|ACU22829.1| unknown [Glycine max]                                  179   2e-43
ref|XP_002523686.1| snf1-kinase beta subunit, plants, putative [...   177   6e-43
ref|XP_002277230.1| PREDICTED: SNF1-related protein kinase regul...   174   9e-42
ref|XP_002313527.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41

>ref|XP_003538198.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           beta-3-like [Glycine max]
          Length = 117

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/115 (75%), Positives = 98/115 (85%)
 Frame = -2

Query: 483 MDSMHGENFDEVNVAGFDVPRSPDSSYDNPYPGTEDEAREPPMVPPHLQHTLLSVPTGRD 304
           M + H EN DEV VAGF+VP+SPDSSY+N YPG EDEAR+PPMVP HLQHTLL+ P  RD
Sbjct: 1   MSNSHSENHDEVTVAGFEVPKSPDSSYNNVYPGNEDEARDPPMVPSHLQHTLLNYPANRD 60

Query: 303 GVGTLAPPQNVILNHLYIENRESPRSVVALGVTHRFRSKFVTVVLYKPIQRRGSS 139
             GT+  PQNVILNHLYIENRESPRSVVALG THRF SK+VTVVLYKP+QRRG++
Sbjct: 61  TAGTVPLPQNVILNHLYIENRESPRSVVALGFTHRFHSKYVTVVLYKPVQRRGNT 115


>gb|ACU22829.1| unknown [Glycine max]
          Length = 117

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/115 (72%), Positives = 95/115 (82%)
 Frame = -2

Query: 483 MDSMHGENFDEVNVAGFDVPRSPDSSYDNPYPGTEDEAREPPMVPPHLQHTLLSVPTGRD 304
           M + H EN DE  V GF+VP+SPDSSY+N YPG EDEAR+PPMVP HLQHTLL+ P  RD
Sbjct: 1   MSNSHSENHDEATVVGFEVPKSPDSSYNNVYPGNEDEARDPPMVPSHLQHTLLNYPANRD 60

Query: 303 GVGTLAPPQNVILNHLYIENRESPRSVVALGVTHRFRSKFVTVVLYKPIQRRGSS 139
             GT+  P+NVILNHLYIENRESPR VV LG THRFRSK+VTVVLYKP+QRRG++
Sbjct: 61  TAGTVPLPKNVILNHLYIENRESPRFVVGLGFTHRFRSKYVTVVLYKPVQRRGNT 115


>ref|XP_002523686.1| snf1-kinase beta subunit, plants, putative [Ricinus communis]
           gi|223536990|gb|EEF38626.1| snf1-kinase beta subunit,
           plants, putative [Ricinus communis]
          Length = 117

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/115 (71%), Positives = 96/115 (83%)
 Frame = -2

Query: 483 MDSMHGENFDEVNVAGFDVPRSPDSSYDNPYPGTEDEAREPPMVPPHLQHTLLSVPTGRD 304
           M + +GE+ ++  V GF+VP+SPDSSY+N YPG ED+AR+PP VPPHLQHTLLS P   D
Sbjct: 1   MSNQYGEDHEDTTVVGFEVPKSPDSSYNNAYPGNEDDARDPPAVPPHLQHTLLSYPASAD 60

Query: 303 GVGTLAPPQNVILNHLYIENRESPRSVVALGVTHRFRSKFVTVVLYKPIQRRGSS 139
              T+  PQNVILNHLYIENRE+PRSVVALG THRFRSK+VTVVLYKP+QRRGSS
Sbjct: 61  TSETIPEPQNVILNHLYIENREAPRSVVALGFTHRFRSKYVTVVLYKPVQRRGSS 115


>ref|XP_002277230.1| PREDICTED: SNF1-related protein kinase regulatory subunit beta-3
           isoform 2 [Vitis vinifera]
           gi|225436534|ref|XP_002277210.1| PREDICTED: SNF1-related
           protein kinase regulatory subunit beta-3 isoform 1
           [Vitis vinifera] gi|297734940|emb|CBI17174.3| unnamed
           protein product [Vitis vinifera]
          Length = 117

 Score =  174 bits (440), Expect = 9e-42
 Identities = 82/115 (71%), Positives = 97/115 (84%)
 Frame = -2

Query: 483 MDSMHGENFDEVNVAGFDVPRSPDSSYDNPYPGTEDEAREPPMVPPHLQHTLLSVPTGRD 304
           M++ +GE+ D+  V GF+VP+SPDSSY+N YPG EDEA++PP VPPHL H LLS P+ RD
Sbjct: 1   MNNPYGEDQDDTTVVGFEVPKSPDSSYNNVYPGHEDEAKDPPPVPPHLLHPLLSHPSSRD 60

Query: 303 GVGTLAPPQNVILNHLYIENRESPRSVVALGVTHRFRSKFVTVVLYKPIQRRGSS 139
             GTL  PQNVILNHLYIENRE+PRSVVALG+THRFRSKFVTVVLYKP+QR  S+
Sbjct: 61  TSGTLPVPQNVILNHLYIENRETPRSVVALGITHRFRSKFVTVVLYKPVQRSAST 115


>ref|XP_002313527.1| predicted protein [Populus trichocarpa] gi|222849935|gb|EEE87482.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/115 (71%), Positives = 93/115 (80%)
 Frame = -2

Query: 483 MDSMHGENFDEVNVAGFDVPRSPDSSYDNPYPGTEDEAREPPMVPPHLQHTLLSVPTGRD 304
           M +   E+ ++  VAGF+VPRSPDSSY+N YPG EDE R+PP VPPHLQH+LLS P   D
Sbjct: 1   MSNQFSEDNEDATVAGFEVPRSPDSSYNNAYPGNEDEVRDPPSVPPHLQHSLLSYPASAD 60

Query: 303 GVGTLAPPQNVILNHLYIENRESPRSVVALGVTHRFRSKFVTVVLYKPIQRRGSS 139
              TL  PQNVILNHLYIENRE+PRSVVALG THRF SKFVTVVLYKP+QRRGS+
Sbjct: 61  SSETLPLPQNVILNHLYIENRETPRSVVALGFTHRFHSKFVTVVLYKPVQRRGST 115


Top