BLASTX nr result

ID: Cimicifuga21_contig00024103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024103
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN87434.1| NBS-containing resistance-like protein [Corylus a...    79   5e-13
emb|CBI36426.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_002267795.1| PREDICTED: putative disease resistance prote...    78   7e-13
gb|AAL84888.1| NBS-LRR-like protein [Mentha longifolia]                75   4e-12
ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca...    74   1e-11

>gb|ACN87434.1| NBS-containing resistance-like protein [Corylus avellana]
          Length = 160

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
 Frame = -3

Query: 213 WSELKLSLDGGAPGSRIIVTTRNEGVAKMMGSTHVHNLGKLSEDDSWQLLRAVALKGRE- 37
           W  L+ +L  G PGSRI+VTTRN GVA+MM S+ +  LGKLSEDD W L   +A  GRE 
Sbjct: 83  WESLRDTLKFGVPGSRIVVTTRNGGVARMMESSCILPLGKLSEDDCWLLFSRIAFSGREA 142

Query: 36  EELEKFEKTGKE 1
           EE EK E  G+E
Sbjct: 143 EECEKVEDVGRE 154


>emb|CBI36426.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = -3

Query: 228 DNPNHWSELKLSLDGGAPGSRIIVTTRNEGVAKMMGSTHVHNLGKLSEDDSWQLLRAVAL 49
           +N   W +++ SL GGAPGSRI+VTTRNE V+ MMG+T+ H LG+LS++  W L   +A 
Sbjct: 84  ENYELWEQVESSLKGGAPGSRILVTTRNENVSTMMGTTYKHPLGELSKEQCWSLFSNIAF 143

Query: 48  KGR-EEELEKFEKTGKE 1
            GR  E++E+ E  G++
Sbjct: 144 YGRSREKVEELENIGRK 160


>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 928

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = -3

Query: 228 DNPNHWSELKLSLDGGAPGSRIIVTTRNEGVAKMMGSTHVHNLGKLSEDDSWQLLRAVAL 49
           +N   W +++ SL GGAPGSRI+VTTRNE V+ MMG+T+ H LG+LS++  W L   +A 
Sbjct: 286 ENYELWEQVESSLKGGAPGSRILVTTRNENVSTMMGTTYKHPLGELSKEQCWSLFSNIAF 345

Query: 48  KGR-EEELEKFEKTGKE 1
            GR  E++E+ E  G++
Sbjct: 346 YGRSREKVEELENIGRK 362


>gb|AAL84888.1| NBS-LRR-like protein [Mentha longifolia]
          Length = 175

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/79 (48%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
 Frame = -3

Query: 228 DNPNHWSELKLSLDGGAPGSRIIVTTRNEGVAKMMGST--HVHNLGKLSEDDSWQLLRAV 55
           ++ N W  LK++L+ GA GS ++VTTRNE VAKMMG++  H+++   LS+D+ W LLR +
Sbjct: 85  EDHNKWEPLKVNLNDGAAGSMVLVTTRNERVAKMMGTSDGHIYHPQHLSDDNCWSLLRRI 144

Query: 54  ALKGR-EEELEKFEKTGKE 1
           +L GR EE+   FE  GK+
Sbjct: 145 SLSGRSEEQCGMFEDVGKK 163


>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 906

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
 Frame = -3

Query: 213 WSELKLSLDGGAPGSRIIVTTRNEGVAKMMGSTHVHNLGKLSEDDSWQLLRAVALKGR-E 37
           W  +K+ L  GAPGSRI+VTTRNEGV+KMM + ++  LGKLS +DSW L    A  G+  
Sbjct: 290 WEPIKVPLKSGAPGSRILVTTRNEGVSKMMDAAYMLPLGKLSPEDSWSLFSKFAFYGKSR 349

Query: 36  EELEKFEKTGKE 1
           E+ +  E+ G+E
Sbjct: 350 EDRDNLEEIGRE 361


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