BLASTX nr result

ID: Cimicifuga21_contig00024094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024094
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1...   338   2e-90
ref|XP_002315216.1| predicted protein [Populus trichocarpa] gi|2...   324   3e-86
ref|XP_002531577.1| protein binding protein, putative [Ricinus c...   320   4e-85
emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]   320   5e-85
gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]     318   1e-84

>ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera]
           gi|296086209|emb|CBI31650.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  338 bits (866), Expect = 2e-90
 Identities = 178/276 (64%), Positives = 194/276 (70%)
 Frame = -2

Query: 991 MSFVFRGTRADLEGGFPGFIPERRAMRVHAARPANTNSMAXXXXXXXXXXXLNSHQMSPN 812
           MSFVFRG+RAD+E GFPGFIPERRA+RVHAARP NTNS+A           LNSHQMSPN
Sbjct: 1   MSFVFRGSRADIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSPN 60

Query: 811 XXXXXXXXXXXVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXXX 632
                      +AT+LRMYATC        A   A SGLLGHTELRLHMPPSI  AT   
Sbjct: 61  FLIWLVLGIFLMATTLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRGR 120

Query: 631 XXXXXXXXXXLDREFDDLDYETLRALDSDXXXXXXXXXXXXXNALPVHKYKVIGPQSDGL 452
                     LDREFDDLDYETLRALDS+             NALPVHKYKV G Q  G 
Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGGS 180

Query: 451 SRQQVPSSSSTVEKSQELTSADENTKALEDELTCSVCLEQVNVGEVIRSLPCLHQFHANC 272
           S QQ  SSS++ EK Q++ +A  +TKA +DELTCSVCLEQVNVGE+IRSLPCLHQFHANC
Sbjct: 181 SMQQ-GSSSASAEKKQDINNAVASTKAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANC 239

Query: 271 IDPWLRQQGTCPVCKFRAGSAWQENGESGMDASYMV 164
           IDPWLRQQGTCPVCKFRA   WQENG+ GMDASYMV
Sbjct: 240 IDPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 275


>ref|XP_002315216.1| predicted protein [Populus trichocarpa] gi|222864256|gb|EEF01387.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  324 bits (831), Expect = 3e-86
 Identities = 166/276 (60%), Positives = 187/276 (67%)
 Frame = -2

Query: 991 MSFVFRGTRADLEGGFPGFIPERRAMRVHAARPANTNSMAXXXXXXXXXXXLNSHQMSPN 812
           MSFVFRG R+D+E GFP F+PERR +RVHA RP N+NS+            LNSHQMSPN
Sbjct: 1   MSFVFRGARSDIENGFPSFVPERRTLRVHATRPVNSNSLVFLVTVLLLFMILNSHQMSPN 60

Query: 811 XXXXXXXXXXXVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXXX 632
                      +AT+LRMYATC        A  +  SGLLGHTELRLHMPPSI  AT   
Sbjct: 61  FLLWLVLGVFFMATTLRMYATCQQLQAQAQAHAVMASGLLGHTELRLHMPPSIALATRGR 120

Query: 631 XXXXXXXXXXLDREFDDLDYETLRALDSDXXXXXXXXXXXXXNALPVHKYKVIGPQSDGL 452
                     LDREFDDLDYETLRALD D             NALPVHKYKV GPQ+ G 
Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDGDNVPNGTSMSEEEINALPVHKYKVTGPQNGGS 180

Query: 451 SRQQVPSSSSTVEKSQELTSADENTKALEDELTCSVCLEQVNVGEVIRSLPCLHQFHANC 272
           S QQ  SS S  +K Q+  +A  + K+ +DELTCSVCLEQV++GEVIR+LPCLHQFHANC
Sbjct: 181 SMQQASSSVSAEQKKQDTGNAIGSMKSSDDELTCSVCLEQVSMGEVIRTLPCLHQFHANC 240

Query: 271 IDPWLRQQGTCPVCKFRAGSAWQENGESGMDASYMV 164
           IDPWLRQQGTCPVCKFRAGS W ENG+ G+DASYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAGSGWNENGQGGLDASYMV 276


>ref|XP_002531577.1| protein binding protein, putative [Ricinus communis]
           gi|223528807|gb|EEF30813.1| protein binding protein,
           putative [Ricinus communis]
          Length = 276

 Score =  320 bits (821), Expect = 4e-85
 Identities = 170/276 (61%), Positives = 183/276 (66%)
 Frame = -2

Query: 991 MSFVFRGTRADLEGGFPGFIPERRAMRVHAARPANTNSMAXXXXXXXXXXXLNSHQMSPN 812
           MSFVFRGTRADLE GF GFIPERRA+RVHA RP N+NS+            LNS QMSPN
Sbjct: 1   MSFVFRGTRADLENGFQGFIPERRAVRVHATRPVNSNSLVFLVTVLLLFMILNSQQMSPN 60

Query: 811 XXXXXXXXXXXVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXXX 632
                      +ATSLRMY TC        A     SGLLGHTELRLHMPPSI  AT   
Sbjct: 61  FLLWLVLGVFLMATSLRMYVTCQQLQAQAQAHATMASGLLGHTELRLHMPPSIALATRGR 120

Query: 631 XXXXXXXXXXLDREFDDLDYETLRALDSDXXXXXXXXXXXXXNALPVHKYKVIGPQSDGL 452
                     LDREFDDLDYETLRALDSD             NALPVHKYK+   Q+ G 
Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDSDNVPTTASMSDEEINALPVHKYKLTALQTGGS 180

Query: 451 SRQQVPSSSSTVEKSQELTSADENTKALEDELTCSVCLEQVNVGEVIRSLPCLHQFHANC 272
           S QQ  SS S   K Q+  +A  + KA EDELTCSVCLEQVNVGE+IR+LPCLHQFHANC
Sbjct: 181 SMQQASSSVSAEPKKQDTANAVGSMKASEDELTCSVCLEQVNVGELIRTLPCLHQFHANC 240

Query: 271 IDPWLRQQGTCPVCKFRAGSAWQENGESGMDASYMV 164
           IDPWLRQQGTCPVCKFRA S W ENG+ G+DASYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAASGWHENGQGGLDASYMV 276


>emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]
          Length = 262

 Score =  320 bits (820), Expect = 5e-85
 Identities = 172/276 (62%), Positives = 184/276 (66%)
 Frame = -2

Query: 991 MSFVFRGTRADLEGGFPGFIPERRAMRVHAARPANTNSMAXXXXXXXXXXXLNSHQMSPN 812
           MSFVFRG+RAD+E GFPGFIPERRA+RVHAARP NTNS+A           LNSHQMSPN
Sbjct: 1   MSFVFRGSRADIESGFPGFIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSPN 60

Query: 811 XXXXXXXXXXXVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXXX 632
                      +AT+LRMYATC        A   A SGLLGHTELRLHMPPSI  AT   
Sbjct: 61  FLIWLVLGIFLMATTLRMYATCQQLQAHAQAHAAAASGLLGHTELRLHMPPSIALATRGR 120

Query: 631 XXXXXXXXXXLDREFDDLDYETLRALDSDXXXXXXXXXXXXXNALPVHKYKVIGPQSDGL 452
                     LDREFDDLDYETLRALDS+             NALPVHKYKV G Q  G 
Sbjct: 121 LQGLRLQLALLDREFDDLDYETLRALDSENVPTTPSMSEEEINALPVHKYKVAGTQGGGS 180

Query: 451 SRQQVPSSSSTVEKSQELTSADENTKALEDELTCSVCLEQVNVGEVIRSLPCLHQFHANC 272
           S QQ  SS+S               +A +DELTCSVCLEQVNVGE+IRSLPCLHQFHANC
Sbjct: 181 SMQQGSSSAS--------------AEAPDDELTCSVCLEQVNVGELIRSLPCLHQFHANC 226

Query: 271 IDPWLRQQGTCPVCKFRAGSAWQENGESGMDASYMV 164
           IDPWLRQQGTCPVCKFRA   WQENG+ GMDASYMV
Sbjct: 227 IDPWLRQQGTCPVCKFRAAPGWQENGQGGMDASYMV 262


>gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]
          Length = 275

 Score =  318 bits (816), Expect = 1e-84
 Identities = 176/277 (63%), Positives = 186/277 (67%), Gaps = 1/277 (0%)
 Frame = -2

Query: 991 MSFVFRGTRA-DLEGGFPGFIPERRAMRVHAARPANTNSMAXXXXXXXXXXXLNSHQMSP 815
           MSFVFRGTR  D+E G  GFIPERRAMRVHAARP N+NS+A           LNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 814 NXXXXXXXXXXXVATSLRMYATCXXXXXXXXARVMATSGLLGHTELRLHMPPSIDFATXX 635
           N           +AT+LRMYATC        AR MA SGLLGHTELRLHMPPSI  AT  
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 634 XXXXXXXXXXXLDREFDDLDYETLRALDSDXXXXXXXXXXXXXNALPVHKYKVIGPQSDG 455
                      LDREFDDLDYETLRALDSD             NALPVHKYKV GPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 454 LSRQQVPSSSSTVEKSQELTSADENTKALEDELTCSVCLEQVNVGEVIRSLPCLHQFHAN 275
              QQ  SS S  EK Q+  +A  +TK  EDELTCSVCLEQVNVGE+IRSLPCLHQFHAN
Sbjct: 181 SVNQQASSSESN-EKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHAN 239

Query: 274 CIDPWLRQQGTCPVCKFRAGSAWQENGESGMDASYMV 164
           CIDPWLRQQGTCPVCKFRA S W E G+   DA YMV
Sbjct: 240 CIDPWLRQQGTCPVCKFRAVSGWSEQGQGETDA-YMV 275


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