BLASTX nr result

ID: Cimicifuga21_contig00024093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024093
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   331   1e-88
ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p...   324   1e-86
ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis p...   316   4e-84
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   313   2e-83
gb|AFK43440.1| unknown [Medicago truncatula]                          313   3e-83

>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  331 bits (848), Expect = 1e-88
 Identities = 158/187 (84%), Positives = 173/187 (92%)
 Frame = -3

Query: 706 MRALDENETSAVFEKLLKFTGNNLKNIVEKPSHEGPESNPCRYCFRLQKNKIYYVSESLV 527
           MR LDENET+AVFEKL KFTGNNLKNIVE PSHEGP+ NP RYCFRLQKN++YYVSESLV
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSHEGPDPNPGRYCFRLQKNRVYYVSESLV 60

Query: 526 NRSTRISRDKLISIGTCIGKFTKGGQFHLTIQALNLLAENARHKVWLKPTSEMSFLYGNH 347
            R+T I R +L+S+GTCIGKFTKGG+FHLT+Q++NLLA NA+HKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 346 VLKGGLGRITENINAGDGVVVFSMADVPLGFGIAAKSTQDCMKLDPNGIVVLHQADTGEY 167
           VLKGGLGRITENI AGDG+VVFSM+DVPLGFGIAAKSTQDC KLDPNGIVVLHQAD GEY
Sbjct: 121 VLKGGLGRITENIVAGDGIVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQADIGEY 180

Query: 166 LRMEDVL 146
           LRMED L
Sbjct: 181 LRMEDEL 187


>ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera]
          Length = 187

 Score =  324 bits (830), Expect = 1e-86
 Identities = 155/187 (82%), Positives = 172/187 (91%)
 Frame = -3

Query: 706 MRALDENETSAVFEKLLKFTGNNLKNIVEKPSHEGPESNPCRYCFRLQKNKIYYVSESLV 527
           MR LDENET+AVFEKL KFTGNNLKNIVE PS+EGP+ N  RYCFRLQKN++YYVSES+V
Sbjct: 1   MRPLDENETTAVFEKLFKFTGNNLKNIVENPSYEGPDPNAGRYCFRLQKNRVYYVSESMV 60

Query: 526 NRSTRISRDKLISIGTCIGKFTKGGQFHLTIQALNLLAENARHKVWLKPTSEMSFLYGNH 347
            R+T I R +L+S+GTCIGKFTKGG+FHLT+Q++NLLA NA+HKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNH 120

Query: 346 VLKGGLGRITENINAGDGVVVFSMADVPLGFGIAAKSTQDCMKLDPNGIVVLHQADTGEY 167
           VLKGGLGRITENI AGDGVVVFSM+DVPLGFGIAAKSTQDC KLDPNGIVVLHQ+D GEY
Sbjct: 121 VLKGGLGRITENIVAGDGVVVFSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 166 LRMEDVL 146
           LRMED L
Sbjct: 181 LRMEDEL 187


>ref|XP_003549654.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Glycine max]
          Length = 187

 Score =  316 bits (809), Expect = 4e-84
 Identities = 151/187 (80%), Positives = 165/187 (88%)
 Frame = -3

Query: 706 MRALDENETSAVFEKLLKFTGNNLKNIVEKPSHEGPESNPCRYCFRLQKNKIYYVSESLV 527
           MR LDE ETSAVFEKL KF GNNLKNIVE PSHEGP+SNP RYCFRL KNKI+Y SESLV
Sbjct: 1   MRPLDEKETSAVFEKLFKFVGNNLKNIVENPSHEGPDSNPGRYCFRLHKNKIFYASESLV 60

Query: 526 NRSTRISRDKLISIGTCIGKFTKGGQFHLTIQALNLLAENARHKVWLKPTSEMSFLYGNH 347
            R+T ++R  L+S+GTCIGK+T GG FHLT+QALNLLA NA+HKVWLKP SEMSFLYGNH
Sbjct: 61  KRATNVARPNLVSLGTCIGKYTHGGSFHLTVQALNLLAANAKHKVWLKPQSEMSFLYGNH 120

Query: 346 VLKGGLGRITENINAGDGVVVFSMADVPLGFGIAAKSTQDCMKLDPNGIVVLHQADTGEY 167
           VLKG LG+++ENI AGDGVVVFSMADVPLGFG+AAKST DC KLDPNGIVVLHQAD GEY
Sbjct: 121 VLKGALGKLSENIAAGDGVVVFSMADVPLGFGVAAKSTLDCRKLDPNGIVVLHQADVGEY 180

Query: 166 LRMEDVL 146
           LRMED L
Sbjct: 181 LRMEDEL 187


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  313 bits (803), Expect = 2e-83
 Identities = 150/187 (80%), Positives = 165/187 (88%)
 Frame = -3

Query: 706 MRALDENETSAVFEKLLKFTGNNLKNIVEKPSHEGPESNPCRYCFRLQKNKIYYVSESLV 527
           MR LDE ET+ VFEKL KFTGNNLKNIVE PSHEG E NP RYCFRL KNK+YYVS+SLV
Sbjct: 1   MRPLDEQETTVVFEKLHKFTGNNLKNIVENPSHEGTEPNPGRYCFRLHKNKVYYVSDSLV 60

Query: 526 NRSTRISRDKLISIGTCIGKFTKGGQFHLTIQALNLLAENARHKVWLKPTSEMSFLYGNH 347
            R+T ++R  L+S+GTCIGKFT GG FHLT+Q+L LL+ NA+HKVWLKPTSEMSFLYGNH
Sbjct: 61  KRATNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNH 120

Query: 346 VLKGGLGRITENINAGDGVVVFSMADVPLGFGIAAKSTQDCMKLDPNGIVVLHQADTGEY 167
           VLKGGLGRITENI  GDGVVV+SM+DVPLGFGIAAKSTQDC KLDPNGIVVLHQ+D GEY
Sbjct: 121 VLKGGLGRITENIVPGDGVVVYSMSDVPLGFGIAAKSTQDCRKLDPNGIVVLHQSDIGEY 180

Query: 166 LRMEDVL 146
           LRMED L
Sbjct: 181 LRMEDEL 187


>gb|AFK43440.1| unknown [Medicago truncatula]
          Length = 187

 Score =  313 bits (801), Expect = 3e-83
 Identities = 150/187 (80%), Positives = 163/187 (87%)
 Frame = -3

Query: 706 MRALDENETSAVFEKLLKFTGNNLKNIVEKPSHEGPESNPCRYCFRLQKNKIYYVSESLV 527
           MR LDE ETS VFEKL KF GNNLKN+VE PSHEGP+SNP RYCFRL KNKIYY SESLV
Sbjct: 1   MRPLDETETSVVFEKLFKFVGNNLKNLVENPSHEGPDSNPGRYCFRLNKNKIYYCSESLV 60

Query: 526 NRSTRISRDKLISIGTCIGKFTKGGQFHLTIQALNLLAENARHKVWLKPTSEMSFLYGNH 347
            R+T I+R  L+S+GTCIGK+T GG FHLT+QALNLLA NA+HKVWLKP SEMSFLYGNH
Sbjct: 61  KRATNIARPNLVSLGTCIGKYTHGGNFHLTVQALNLLAANAKHKVWLKPQSEMSFLYGNH 120

Query: 346 VLKGGLGRITENINAGDGVVVFSMADVPLGFGIAAKSTQDCMKLDPNGIVVLHQADTGEY 167
           VLK  LGRITENI +GDGVVVFSM+DVPLGFG+AAKSTQDC KLDPNGIVVLHQ D GEY
Sbjct: 121 VLKSALGRITENIVSGDGVVVFSMSDVPLGFGVAAKSTQDCRKLDPNGIVVLHQGDIGEY 180

Query: 166 LRMEDVL 146
           LR+ED L
Sbjct: 181 LRIEDEL 187


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