BLASTX nr result

ID: Cimicifuga21_contig00024076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024076
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC43061.1| unknown protein [Arabidopsis thaliana]                 64   1e-08
ref|NP_178543.2| anaphase-promoting complex subunit 2 [Arabidops...    64   1e-08
gb|AAD22340.1| E3 ubiquitin ligase APC2, putative [Arabidopsis t...    64   1e-08
gb|EEE61214.1| hypothetical protein OsJ_15239 [Oryza sativa Japo...    63   2e-08
ref|NP_001053127.2| Os04g0484800 [Oryza sativa Japonica Group] g...    63   2e-08

>dbj|BAC43061.1| unknown protein [Arabidopsis thaliana]
          Length = 865

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
 Frame = +1

Query: 1   GETSVASHE-QLREEMALYEQFIIAMLTNLGGMSLERTHNNLKRFCGA 141
           GETS+AS E QLR+EM +YE+FI+ MLTN G M+LER HN LK FC A
Sbjct: 783 GETSIASVEDQLRKEMTIYEKFIMGMLTNFGSMALERIHNTLKMFCVA 830


>ref|NP_178543.2| anaphase-promoting complex subunit 2 [Arabidopsis thaliana]
           gi|75151976|sp|Q8H1U5.1|APC2_ARATH RecName:
           Full=Anaphase-promoting complex subunit 2; AltName:
           Full=Cyclosome subunit 2 gi|23429518|gb|AAN10196.1| APC2
           [Arabidopsis thaliana] gi|330250759|gb|AEC05853.1|
           anaphase-promoting complex subunit 2 [Arabidopsis
           thaliana]
          Length = 865

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
 Frame = +1

Query: 1   GETSVASHE-QLREEMALYEQFIIAMLTNLGGMSLERTHNNLKRFCGA 141
           GETS+AS E QLR+EM +YE+FI+ MLTN G M+LER HN LK FC A
Sbjct: 783 GETSIASVEDQLRKEMTIYEKFIMGMLTNFGSMALERIHNTLKMFCVA 830


>gb|AAD22340.1| E3 ubiquitin ligase APC2, putative [Arabidopsis thaliana]
          Length = 873

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/48 (66%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
 Frame = +1

Query: 1   GETSVASHE-QLREEMALYEQFIIAMLTNLGGMSLERTHNNLKRFCGA 141
           GETS+AS E QLR+EM +YE+FI+ MLTN G M+LER HN LK FC A
Sbjct: 791 GETSIASVEDQLRKEMTIYEKFIMGMLTNFGSMALERIHNTLKMFCVA 838


>gb|EEE61214.1| hypothetical protein OsJ_15239 [Oryza sativa Japonica Group]
          Length = 864

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   GETSVAS-HEQLREEMALYEQFIIAMLTNLGGMSLERTHNNLKRFC 135
           GE+S+AS  EQLR+EM +YE+FII MLTN G M+L+R HN LK FC
Sbjct: 782 GESSIASVEEQLRKEMTVYEKFIIGMLTNFGSMTLDRIHNTLKMFC 827


>ref|NP_001053127.2| Os04g0484800 [Oryza sativa Japonica Group]
           gi|215697191|dbj|BAG91185.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218195082|gb|EEC77509.1| hypothetical protein
           OsI_16372 [Oryza sativa Indica Group]
           gi|255675573|dbj|BAF15041.2| Os04g0484800 [Oryza sativa
           Japonica Group]
          Length = 864

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/46 (65%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   GETSVAS-HEQLREEMALYEQFIIAMLTNLGGMSLERTHNNLKRFC 135
           GE+S+AS  EQLR+EM +YE+FII MLTN G M+L+R HN LK FC
Sbjct: 782 GESSIASVEEQLRKEMTVYEKFIIGMLTNFGSMTLDRIHNTLKMFC 827


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