BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024069
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...   189   2e-46
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...   170   1e-40
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...   170   1e-40
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi...   169   2e-40

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
            [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
            protein product [Vitis vinifera]
          Length = 878

 Score =  202 bits (515), Expect = 2e-50
 Identities = 100/149 (67%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
 Frame = +2

Query: 2    FDVGGFSYKDLIEGLCKEEKLKEACSILHKMIDKGYQFDPASFMPVIDALGKSGNKHEAD 181
            FD+G F Y DLIE LCK+E L+ A  ILHKMIDKGY+FDPASFMPVID LGK G KH+AD
Sbjct: 733  FDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDAD 792

Query: 182  ELAESMMEMASDGREVSK-TRHKGYNEKKKLNSGKPQTDGSDWQTILHRDDGSGIVVKAL 358
            ELAE MM+MAS+G   +K TR++    ++K N    +  GSDWQTI+HRDDGSG+ +KAL
Sbjct: 793  ELAERMMDMASEGMVENKITRNESAFNRQKRN----KFSGSDWQTIIHRDDGSGLALKAL 848

Query: 359  KRVQKGWGQGSITSLQPIQNDFPDYWEDT 445
            KRVQKGWGQGSI+SLQP +NDF DYWE T
Sbjct: 849  KRVQKGWGQGSISSLQPQKNDFLDYWEGT 877


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/147 (63%), Positives = 112/147 (76%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2    FDVGGFSYKDLIEGLCKEEKLKEACSILHKMIDKGYQFDPASFMPVIDALGKSGNKHEAD 181
            FD+G F YKDLI+ LCK+EKL+ A  +LH++IDKGYQFDPASFMPVID  GK GNKH AD
Sbjct: 729  FDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVAD 788

Query: 182  ELAESMMEMASDGREVSKTRHKGY-NEKKKLNSGKPQTDGSDWQTILHRDDGSGIVVKAL 358
            ELAE MMEMAS+    S   +K Y N K  +   K +  G+DW  I+HRDDGSGI +KAL
Sbjct: 789  ELAERMMEMASE----SNKENKAYPNVKGHILRNKNKDAGNDWPIIVHRDDGSGIALKAL 844

Query: 359  KRVQKGWGQGSITSLQPIQNDFPDYWE 439
            KRVQKGWGQGSI+SLQP + +F DYW+
Sbjct: 845  KRVQKGWGQGSISSLQPQKLEFFDYWD 871


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|330251496|gb|AEC06590.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  170 bits (431), Expect = 1e-40
 Identities = 83/149 (55%), Positives = 108/149 (72%), Gaps = 2/149 (1%)
 Frame = +2

Query: 2    FDVGGFSYKDLIEGLCKEEKLKEACSILHKMIDKGYQFDPASFMPVIDALGKSGNKHEAD 181
            F++G F YKDL+E LCK+++L+ A  ILHKMID+GY FDPA+ MPVID LGK GNK EA+
Sbjct: 729  FELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEAN 788

Query: 182  ELAESMMEMASDGREVSKT--RHKGYNEKKKLNSGKPQTDGSDWQTILHRDDGSGIVVKA 355
              A+ MMEMAS G   +K     +  ++KK   +G     G++WQ ILHRDDGSGI +++
Sbjct: 789  SFADKMMEMASVGEVANKVDPNARDIHQKKHNKNG-----GNNWQNILHRDDGSGIALRS 843

Query: 356  LKRVQKGWGQGSITSLQPIQNDFPDYWED 442
            L RV+KGWGQG I+S QP + D+ DYWED
Sbjct: 844  LSRVKKGWGQGDISSFQPPRVDYLDYWED 872


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 874

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/147 (56%), Positives = 106/147 (72%)
 Frame = +2

Query: 2    FDVGGFSYKDLIEGLCKEEKLKEACSILHKMIDKGYQFDPASFMPVIDALGKSGNKHEAD 181
            F++G F YKDL+  LCK+++L+ A  ILHKMIDKGY FDPA+ MPVID LGK GNK EA+
Sbjct: 729  FELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEAN 788

Query: 182  ELAESMMEMASDGREVSKTRHKGYNEKKKLNSGKPQTDGSDWQTILHRDDGSGIVVKALK 361
              AE MMEMAS G   +K      +  +K ++   +  G++WQ ILHRDDGSGI +K+L 
Sbjct: 789  NFAEKMMEMASVGEVANKVDPNATDIHQKKHN---KYSGNNWQNILHRDDGSGIALKSLS 845

Query: 362  RVQKGWGQGSITSLQPIQNDFPDYWED 442
            RV+KGWGQG I+S QP + D+ DYWED
Sbjct: 846  RVKKGWGQGDISSFQPQRVDYLDYWED 872


>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Glycine max]
          Length = 875

 Score =  169 bits (428), Expect = 2e-40
 Identities = 86/142 (60%), Positives = 108/142 (76%), Gaps = 1/142 (0%)
 Frame = +2

Query: 17   FSYKDLIEGLCKEEKLKEACSILHKMIDKGYQFDPASFMPVIDALGKSGNKHEADELAES 196
            F YKDLI  LC++E+L +A S+L+K+IDKGY FD ASFMPVID L K GNK +ADELA+ 
Sbjct: 735  FMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKR 794

Query: 197  MMEMASDGREVSKTRHKGYNEKKKLNSGKPQTD-GSDWQTILHRDDGSGIVVKALKRVQK 373
            MME+  + R V +T    Y+ +K++  GK   D GSDWQ I++RD GSGI +K LKRVQK
Sbjct: 795  MMELELEDRPVDRT----YSNRKRVIPGKLLKDGGSDWQDIINRDAGSGIALKTLKRVQK 850

Query: 374  GWGQGSITSLQPIQNDFPDYWE 439
            GWGQGSI+SLQP QNDF DY++
Sbjct: 851  GWGQGSISSLQPQQNDFLDYYD 872