BLASTX nr result

ID: Cimicifuga21_contig00024058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024058
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265506.1| PREDICTED: uncharacterized protein LOC100246...    86   5e-15
ref|XP_002305727.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002317394.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002522252.1| conserved hypothetical protein [Ricinus comm...    69   4e-10
ref|XP_003634658.1| PREDICTED: uncharacterized protein LOC100250...    68   1e-09

>ref|XP_002265506.1| PREDICTED: uncharacterized protein LOC100246308 [Vitis vinifera]
           gi|147781893|emb|CAN69942.1| hypothetical protein
           VITISV_006130 [Vitis vinifera]
          Length = 97

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 45/75 (60%), Positives = 51/75 (68%)
 Frame = -3

Query: 390 DARKLLLAKVKVQENHKAFSLEDSLVLNSFAKGKVPPSAPSNKGHATIIDEKLFVMHLAS 211
           DARKLL  +          +LE SLVL +  KG VP S+PS KGHA ++DEKL   HLA 
Sbjct: 23  DARKLLDMEEDSHNKKSIPALEASLVLAALPKGTVPASSPSKKGHAMVVDEKLIARHLAV 82

Query: 210 VDRILRSVPSPGVGH 166
           VDRILRSVPSPGVGH
Sbjct: 83  VDRILRSVPSPGVGH 97


>ref|XP_002305727.1| predicted protein [Populus trichocarpa] gi|222848691|gb|EEE86238.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 8/83 (9%)
 Frame = -3

Query: 390 DARKLLLAKVKVQENHKAFSLED--------SLVLNSFAKGKVPPSAPSNKGHATIIDEK 235
           + RKLL++    QEN  + + E         SLVL++  KG VP S+PS KGHAT+ +E+
Sbjct: 23  EGRKLLMSTGTPQENSSSSNKEGTSSVSSFASLVLSALPKGTVPSSSPSKKGHATLDNEQ 82

Query: 234 LFVMHLASVDRILRSVPSPGVGH 166
           LF  HLAS+DRILRSVPSPGVGH
Sbjct: 83  LFARHLASIDRILRSVPSPGVGH 105


>ref|XP_002317394.1| predicted protein [Populus trichocarpa] gi|222860459|gb|EEE98006.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
 Frame = -3

Query: 390 DARKLLLAKVKVQENHKAFSLED-----SLVLNSFAKGKVPPSA-PSNKGHATIIDEKLF 229
           + RKLL++    + N  ++         SLVL++  KGKVP S+ PS KGHAT+ +E++F
Sbjct: 23  EGRKLLMSTSAQESNSNSWDKRSVSSFASLVLSALPKGKVPSSSSPSKKGHATLDNEQIF 82

Query: 228 VMHLASVDRILRSVPSPGVGH 166
             HLAS+DRILRSVPSPGVG+
Sbjct: 83  ARHLASIDRILRSVPSPGVGN 103


>ref|XP_002522252.1| conserved hypothetical protein [Ricinus communis]
           gi|223538505|gb|EEF40110.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 34/56 (60%), Positives = 43/56 (76%)
 Frame = -3

Query: 333 SLEDSLVLNSFAKGKVPPSAPSNKGHATIIDEKLFVMHLASVDRILRSVPSPGVGH 166
           S+  SLV ++  K  V  S+PS KGHAT+ +E+LF  HLAS+DRIL+SVPSPGVGH
Sbjct: 45  SMFASLVFSALPKSTVRSSSPSRKGHATLDNEELFRRHLASIDRILQSVPSPGVGH 100


>ref|XP_003634658.1| PREDICTED: uncharacterized protein LOC100250351 [Vitis vinifera]
          Length = 97

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
 Frame = -3

Query: 390 DARKLLLAKVKVQENHKAFSLEDSLVLNSFAKGKVPPSAPSNKGHATI-IDEKLFVMHLA 214
           DARKLL     +++     S+E+SL+L S  KG  PPS+PS+KG+A + I+ +LF +HL 
Sbjct: 24  DARKLL----SMEKKEGVSSMEESLILPSLPKGSTPPSSPSDKGYAMVNINGRLFSIHLP 79

Query: 213 SV-DRIL-RSVPSPGVGH 166
           S+ DR+L  SVPSPG+GH
Sbjct: 80  SIKDRMLGESVPSPGIGH 97


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