BLASTX nr result

ID: Cimicifuga21_contig00024052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024052
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15107.3| unnamed protein product [Vitis vinifera]              137   3e-30
ref|XP_002280600.1| PREDICTED: microtubule-associated protein TO...   137   3e-30
ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|2...   137   3e-30
ref|XP_002322140.1| predicted protein [Populus trichocarpa] gi|2...   134   3e-29
ref|XP_003517749.1| PREDICTED: microtubule-associated protein SP...   132   8e-29

>emb|CBI15107.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  137 bits (345), Expect = 3e-30
 Identities = 79/143 (55%), Positives = 99/143 (69%), Gaps = 3/143 (2%)
 Frame = +1

Query: 1   MGSSQNGIRSLETRVNGLEMALDEIMYDLTVSTGRISPSDSSENTCCKLPGTDFWSPKFW 180
           MGSSQNG+RSLETRV+GLE+ALDEI +DL VS  R+S +D++  TCC LPG DF S KFW
Sbjct: 379 MGSSQNGLRSLETRVHGLELALDEISFDLAVSNRRMSSTDTAGATCCMLPGADFLSSKFW 438

Query: 181 RKSEGRYSTSRITSSGSTPS---QRNMADKDGSLDPSKSENRRFYHEAGGGGFAVNPLAA 351
           RK+EGR STSR + S +T S    R +A K+ +    KSEN RF  + GGGGF VNPL A
Sbjct: 439 RKTEGRGSTSRFSPSHATQSGTAMRYIAGKNDNAGTFKSENLRFRLQ-GGGGFVVNPL-A 496

Query: 352 EIRNGLRRDAEVYPNLMPMNIYQ 420
           EI +  R  +EV  N +  N ++
Sbjct: 497 EIPSDSRDISEVSSNRISKNAHE 519


>ref|XP_002280600.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Vitis
           vinifera]
          Length = 638

 Score =  137 bits (345), Expect = 3e-30
 Identities = 79/143 (55%), Positives = 99/143 (69%), Gaps = 3/143 (2%)
 Frame = +1

Query: 1   MGSSQNGIRSLETRVNGLEMALDEIMYDLTVSTGRISPSDSSENTCCKLPGTDFWSPKFW 180
           MGSSQNG+RSLETRV+GLE+ALDEI +DL VS  R+S +D++  TCC LPG DF S KFW
Sbjct: 496 MGSSQNGLRSLETRVHGLELALDEISFDLAVSNRRMSSTDTAGATCCMLPGADFLSSKFW 555

Query: 181 RKSEGRYSTSRITSSGSTPS---QRNMADKDGSLDPSKSENRRFYHEAGGGGFAVNPLAA 351
           RK+EGR STSR + S +T S    R +A K+ +    KSEN RF  + GGGGF VNPL A
Sbjct: 556 RKTEGRGSTSRFSPSHATQSGTAMRYIAGKNDNAGTFKSENLRFRLQ-GGGGFVVNPL-A 613

Query: 352 EIRNGLRRDAEVYPNLMPMNIYQ 420
           EI +  R  +EV  N +  N ++
Sbjct: 614 EIPSDSRDISEVSSNRISKNAHE 636


>ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|222859297|gb|EEE96844.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score =  137 bits (345), Expect = 3e-30
 Identities = 75/132 (56%), Positives = 93/132 (70%), Gaps = 3/132 (2%)
 Frame = +1

Query: 1   MGSSQNGIRSLETRVNGLEMALDEIMYDLTVSTGRISPSDSSENTCCKLPGTDFWSPKFW 180
           +GSSQNG+ SLETRV GLE+ALDEI YDL VS+GR++ +DS+  TCC LPG DF S KFW
Sbjct: 492 IGSSQNGMHSLETRVRGLELALDEISYDLAVSSGRMTNTDSNRTTCCLLPGADFLSSKFW 551

Query: 181 RKSEGRYSTSRITSSGSTPSQ---RNMADKDGSLDPSKSENRRFYHEAGGGGFAVNPLAA 351
           +K+EGRYS SRI SS  TP     R+ AD++G  +     N+R   + GGGG  VNPL A
Sbjct: 552 KKTEGRYSNSRIYSSRGTPLSAVVRHRADRNGHSETINLGNQRLRLQ-GGGGLIVNPL-A 609

Query: 352 EIRNGLRRDAEV 387
           EI  G R ++EV
Sbjct: 610 EIHGGSRLNSEV 621


>ref|XP_002322140.1| predicted protein [Populus trichocarpa] gi|222869136|gb|EEF06267.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score =  134 bits (337), Expect = 3e-29
 Identities = 74/132 (56%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
 Frame = +1

Query: 1   MGSSQNGIRSLETRVNGLEMALDEIMYDLTVSTGRISPSDSSENTCCKLPGTDFWSPKFW 180
           +GSSQNG+RSLETRV+GLE+ALDEI YDL VS+  ++  DS+  TCC LPG DF S KFW
Sbjct: 479 IGSSQNGMRSLETRVHGLELALDEISYDLAVSSRGMTNRDSNRTTCCLLPGADFLSSKFW 538

Query: 181 RKSEGRYSTSRITSSGST---PSQRNMADKDGSLDPSKSENRRFYHEAGGGGFAVNPLAA 351
           RK++GRYS SRI+SS  T    + R+ AD++G  + S   N+R   + GG GF VNPL A
Sbjct: 539 RKTDGRYSNSRISSSRGTSLSAAVRHRADRNGQSETSNLGNQRLRLQ-GGAGFIVNPL-A 596

Query: 352 EIRNGLRRDAEV 387
           EI  G R ++EV
Sbjct: 597 EIHGGARVNSEV 608


>ref|XP_003517749.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Glycine
           max]
          Length = 793

 Score =  132 bits (333), Expect = 8e-29
 Identities = 76/148 (51%), Positives = 102/148 (68%), Gaps = 3/148 (2%)
 Frame = +1

Query: 1   MGSSQNGIRSLETRVNGLEMALDEIMYDLTVSTGRISPSDSSENTCCKLPGTDFWSPKFW 180
           +GSSQ+G+ SLE+RV+GLEMALDEI +DL VS GR+S  D++E+TCCKLPGTDF S KFW
Sbjct: 507 IGSSQSGMNSLESRVHGLEMALDEISHDLAVSGGRVSNIDATEDTCCKLPGTDFLSSKFW 566

Query: 181 RKSEGRYSTSRITSSGSTPSQRNM---ADKDGSLDPSKSENRRFYHEAGGGGFAVNPLAA 351
           +K+EGRYSTSR  S GS PS   +    +KDG  +   + N R  H  G GG+ VNPL A
Sbjct: 567 KKTEGRYSTSRF-SLGSIPSTDAVHIATNKDGKREILTANNNRLQH--GKGGYFVNPL-A 622

Query: 352 EIRNGLRRDAEVYPNLMPMNIYQNPERR 435
           E+++ L+     +   +  N++Q+  RR
Sbjct: 623 EVQSDLKGH---HTYKLSKNLFQDAVRR 647


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