BLASTX nr result

ID: Cimicifuga21_contig00024044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024044
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283416.1| PREDICTED: uncharacterized protein LOC100242...   178   2e-42
ref|XP_002515396.1| conserved hypothetical protein [Ricinus comm...   171   3e-40
ref|XP_002309691.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34
ref|XP_002324926.1| predicted protein [Populus trichocarpa] gi|2...   141   3e-31
gb|ABK93859.1| unknown [Populus trichocarpa]                          141   3e-31

>ref|XP_002283416.1| PREDICTED: uncharacterized protein LOC100242247 [Vitis vinifera]
          Length = 183

 Score =  178 bits (451), Expect = 2e-42
 Identities = 99/163 (60%), Positives = 116/163 (71%)
 Frame = +1

Query: 238 FVQADAHTFRELVQKLTGADDNSQEKLPITIPSRYTSSRSPNPNDIVGPRRSAFKLQERR 417
           FVQADA TFR+LVQKLTGA  +S EKLP+T+P R  S+R  + +   GPRRS FKLQERR
Sbjct: 23  FVQADATTFRDLVQKLTGAAVDSPEKLPVTLPVR-ASARPNSVDSSTGPRRSPFKLQERR 81

Query: 418 QNMRKLEIKLGLTTIRNSPSSYSPRQVLSPIPSPVTPLSSDTVFSGRFXXXXXXXXXXXX 597
             MRKLEIKLG+TT+RNSP  +SPR V+SP PSPVTPLSS+++FSGR             
Sbjct: 82  HTMRKLEIKLGITTLRNSPFPHSPR-VVSPTPSPVTPLSSESMFSGR-AGSSGGESPASE 139

Query: 598 XXXXXXXXGYYLHPSPLSTPRGSEPPELLTLFPLQSPKQSSRD 726
                   G+Y  PSP+STPRGSE PELLTLFPL SP Q +RD
Sbjct: 140 EERAIAEKGFYFLPSPMSTPRGSELPELLTLFPLSSPSQRTRD 182


>ref|XP_002515396.1| conserved hypothetical protein [Ricinus communis]
           gi|223545340|gb|EEF46845.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score =  171 bits (432), Expect = 3e-40
 Identities = 95/166 (57%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
 Frame = +1

Query: 238 FVQADAHTFRELVQKLTGADDNSQEKLPITIPSRYTSSRSPNPNDIVGPRRSAFKLQERR 417
           FVQADA+TFR+LVQKLTG+  NS EKLPIT+P+R +S  S +P D  GPRRS FKLQERR
Sbjct: 18  FVQADANTFRDLVQKLTGSTGNSSEKLPITLPTRLSSKLS-HPVDTTGPRRSPFKLQERR 76

Query: 418 QNMRKLEIKLGLTTIRNSPSSYSPRQVLSPIPSPVTPLSSDTVF---SGRFXXXXXXXXX 588
             +RKLEIKLGLT      SS+ P +V S IPSPVTPLSS+++F    G           
Sbjct: 77  HTIRKLEIKLGLT------SSHKPHRVSSTIPSPVTPLSSESLFFRSPGTDQSSSPSSPA 130

Query: 589 XXXXXXXXXXXGYYLHPSPLSTPRGSEPPELLTLFPLQSPKQSSRD 726
                      G+YLHPSPL+TPRG EPPELLTLFPL SP + ++D
Sbjct: 131 VSEEDKAIAEKGFYLHPSPLTTPRGGEPPELLTLFPLSSPSRRNQD 176


>ref|XP_002309691.1| predicted protein [Populus trichocarpa] gi|222855667|gb|EEE93214.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  152 bits (383), Expect = 2e-34
 Identities = 89/165 (53%), Positives = 106/165 (64%), Gaps = 2/165 (1%)
 Frame = +1

Query: 238 FVQADAHTFRELVQKLTGADDNSQEKLPITIPSRYTSSRSP--NPNDIVGPRRSAFKLQE 411
           FVQAD +TFR+LVQKLTG   ++Q +LP+T   R  SS  P  NP D+ GPRRS FKLQE
Sbjct: 20  FVQADINTFRDLVQKLTGLASDTQ-RLPVT---RALSSAKPSRNPVDLTGPRRSPFKLQE 75

Query: 412 RRQNMRKLEIKLGLTTIRNSPSSYSPRQVLSPIPSPVTPLSSDTVFSGRFXXXXXXXXXX 591
           RR  +RKLEIKLGLT++ NS SS  P +    + SPVTPL S  +F              
Sbjct: 76  RRHTLRKLEIKLGLTSLSNSSSS--PTRQTHRLDSPVTPLCSGFLFFPSPGTESPSSPAV 133

Query: 592 XXXXXXXXXXGYYLHPSPLSTPRGSEPPELLTLFPLQSPKQSSRD 726
                     G+Y HPSPL+TPRGSEPPELLTLFPL SP QS++D
Sbjct: 134 LEEEKAIAEKGFYFHPSPLNTPRGSEPPELLTLFPLSSPSQSNQD 178


>ref|XP_002324926.1| predicted protein [Populus trichocarpa] gi|222866360|gb|EEF03491.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  141 bits (355), Expect = 3e-31
 Identities = 86/165 (52%), Positives = 105/165 (63%), Gaps = 2/165 (1%)
 Frame = +1

Query: 238 FVQADAHTFRELVQKLTGADDNSQEKLPITIPSRYTSSRS-PNPNDIVGPRRSAFKLQER 414
           FVQAD ++FR+LVQKLTG   ++Q+ LP T     +SS+S  +P D  GPRRS FKLQER
Sbjct: 13  FVQADTNSFRDLVQKLTGLASDTQQ-LPAT--RILSSSKSFHSPVDFTGPRRSPFKLQER 69

Query: 415 RQNMRKLEIKLGLTTIRNSPSSYSPRQVLSPIPSPVTPLSSDTVF-SGRFXXXXXXXXXX 591
           R   RKLEIKLGLT++ NS S   P +    + SPVTPLSS+ +F               
Sbjct: 70  RHTSRKLEIKLGLTSLSNSSS---PTRQTRQVESPVTPLSSEFLFFPSPATTESPSPPAV 126

Query: 592 XXXXXXXXXXGYYLHPSPLSTPRGSEPPELLTLFPLQSPKQSSRD 726
                     G+YLHPSPL+TPRGSEPPELL LFPL SP QS++D
Sbjct: 127 LEEEKAIAEKGFYLHPSPLNTPRGSEPPELLPLFPLSSPSQSNQD 171


>gb|ABK93859.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  141 bits (355), Expect = 3e-31
 Identities = 86/165 (52%), Positives = 105/165 (63%), Gaps = 2/165 (1%)
 Frame = +1

Query: 238 FVQADAHTFRELVQKLTGADDNSQEKLPITIPSRYTSSRS-PNPNDIVGPRRSAFKLQER 414
           FVQAD ++FR+LVQKLTG   ++Q+ LP T     +SS+S  +P D  GPRRS FKLQER
Sbjct: 24  FVQADTNSFRDLVQKLTGLASDTQQ-LPAT--RILSSSKSFHSPVDFTGPRRSPFKLQER 80

Query: 415 RQNMRKLEIKLGLTTIRNSPSSYSPRQVLSPIPSPVTPLSSDTVF-SGRFXXXXXXXXXX 591
           R   RKLEIKLGLT++ NS S   P +    + SPVTPLSS+ +F               
Sbjct: 81  RHTSRKLEIKLGLTSLSNSSS---PTRQTRQVESPVTPLSSEFLFFPSPATTESPSPPAV 137

Query: 592 XXXXXXXXXXGYYLHPSPLSTPRGSEPPELLTLFPLQSPKQSSRD 726
                     G+YLHPSPL+TPRGSEPPELL LFPL SP QS++D
Sbjct: 138 LEEEKAIAEKGFYLHPSPLNTPRGSEPPELLPLFPLSSPSQSNQD 182


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