BLASTX nr result

ID: Cimicifuga21_contig00024038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024038
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331819.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_002864228.1| hypothetical protein ARALYDRAFT_357563 [Arab...   126   2e-27
ref|NP_200132.2| transcription factor TRY [Arabidopsis thaliana]...   124   1e-26
gb|AFD29597.1| caprice [Gossypium arboreum] gi|380006419|gb|AFD2...   123   1e-26
ref|XP_002268795.1| PREDICTED: transcription factor TRY [Vitis v...   123   2e-26

>ref|XP_002331819.1| predicted protein [Populus trichocarpa] gi|222875057|gb|EEF12188.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score =  129 bits (324), Expect = 2e-28
 Identities = 62/78 (79%), Positives = 67/78 (85%)
 Frame = -3

Query: 239 KRRRKQQKTVKHEFEEVSSIEWEFIQMSEQEEDLIYRMHKLVGDRWDLIAGRIPGRKPEE 60
           +RRRKQ K    E EEVSSIEWEFI MSEQEEDLIYRMH+LVG+RWDLIAGRIPGRK EE
Sbjct: 7   RRRRKQPKINSSESEEVSSIEWEFINMSEQEEDLIYRMHRLVGERWDLIAGRIPGRKAEE 66

Query: 59  IERFWIMKYGEAFATDGK 6
           IERFWIMK+ E FA +GK
Sbjct: 67  IERFWIMKHREGFAENGK 84


>ref|XP_002864228.1| hypothetical protein ARALYDRAFT_357563 [Arabidopsis lyrata subsp.
           lyrata] gi|297310063|gb|EFH40487.1| hypothetical protein
           ARALYDRAFT_357563 [Arabidopsis lyrata subsp. lyrata]
          Length = 106

 Score =  126 bits (316), Expect = 2e-27
 Identities = 57/79 (72%), Positives = 68/79 (86%)
 Frame = -3

Query: 239 KRRRKQQKTVKHEFEEVSSIEWEFIQMSEQEEDLIYRMHKLVGDRWDLIAGRIPGRKPEE 60
           +RRRKQ KT  H+ EEVSSIEWEFI M+EQEEDLI+RM++LVGDRWDLIAGR+PGR+PEE
Sbjct: 7   RRRRKQHKTALHDSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQPEE 66

Query: 59  IERFWIMKYGEAFATDGKQ 3
           IER+WIM+  E FA   +Q
Sbjct: 67  IERYWIMRNSEGFAEKRRQ 85


>ref|NP_200132.2| transcription factor TRY [Arabidopsis thaliana]
           gi|75328865|sp|Q8GV05.1|TRY_ARATH RecName:
           Full=Transcription factor TRY; AltName: Full=Protein
           TRIPTYCHON gi|26516846|gb|AAN78321.1| TRIPTYCHON
           [Arabidopsis thaliana] gi|41618970|gb|AAS09993.1| MYB
           transcription factor [Arabidopsis thaliana]
           gi|88900370|gb|ABD57497.1| At5g53200 [Arabidopsis
           thaliana] gi|332008938|gb|AED96321.1| transcription
           factor TRY [Arabidopsis thaliana]
          Length = 106

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/79 (70%), Positives = 67/79 (84%)
 Frame = -3

Query: 239 KRRRKQQKTVKHEFEEVSSIEWEFIQMSEQEEDLIYRMHKLVGDRWDLIAGRIPGRKPEE 60
           +RRRKQ K   H+ EEVSSIEWEFI M+EQEEDLI+RM++LVGDRWDLIAGR+PGR+PEE
Sbjct: 7   RRRRKQHKIALHDSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVPGRQPEE 66

Query: 59  IERFWIMKYGEAFATDGKQ 3
           IER+WIM+  E FA   +Q
Sbjct: 67  IERYWIMRNSEGFADKRRQ 85


>gb|AFD29597.1| caprice [Gossypium arboreum] gi|380006419|gb|AFD29600.1| CPC-like
           protein [Gossypium hirsutum]
          Length = 83

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/76 (80%), Positives = 65/76 (85%)
 Frame = -3

Query: 245 MDKRRRKQQKTVKHEFEEVSSIEWEFIQMSEQEEDLIYRMHKLVGDRWDLIAGRIPGRKP 66
           MD RRRKQ KT     EEVSSIEWEFI MSEQEEDLIYRM+KLVGD+W LIAGRIPGRK 
Sbjct: 1   MDGRRRKQPKTSGCCSEEVSSIEWEFINMSEQEEDLIYRMYKLVGDKWALIAGRIPGRKA 60

Query: 65  EEIERFWIMKYGEAFA 18
           EEIERFWIM++GE FA
Sbjct: 61  EEIERFWIMRHGEGFA 76


>ref|XP_002268795.1| PREDICTED: transcription factor TRY [Vitis vinifera]
           gi|158323782|gb|ABW34395.1| Myb-related TRIPTYCHON-like
           protein [Vitis vinifera] gi|302143684|emb|CBI22545.3|
           unnamed protein product [Vitis vinifera]
          Length = 88

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/82 (73%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
 Frame = -3

Query: 245 MDKRRRKQQK-TVKHEFEEVSSIEWEFIQMSEQEEDLIYRMHKLVGDRWDLIAGRIPGRK 69
           MD+RRRK  K     + EEVSSIEWEFI MSEQEEDLIYRM++LVGDRWDLIAGRIPGRK
Sbjct: 1   MDRRRRKLPKIAAPSQSEEVSSIEWEFINMSEQEEDLIYRMYRLVGDRWDLIAGRIPGRK 60

Query: 68  PEEIERFWIMKYGEAFATDGKQ 3
           PEEIERFWIM+  + +A  GK+
Sbjct: 61  PEEIERFWIMRNRQGYAERGKE 82