BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024034
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   125   3e-26
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   124   4e-26
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   119   1e-24
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   119   2e-24
ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...   114   8e-23

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
            gi|355511583|gb|AES92725.1| F-box family protein
            [Medicago truncatula]
          Length = 392

 Score =  125 bits (313), Expect = 3e-26
 Identities = 94/328 (28%), Positives = 158/328 (48%), Gaps = 20/328 (6%)
 Frame = -3

Query: 1356 RFRCVCKPWCSSIADSTFIKKHLTRAIERDSVDLLIFNIAISSEKWFVKRDIHGNEIMSF 1177
            R R  CK W + I  + FI  HL+++  RDSV +L                         
Sbjct: 23   RLRSTCKWWRNLIDSTDFIFLHLSKS--RDSVIIL------------------------- 55

Query: 1176 PFYQMHTHCVEGD--SFDKVVKIDNPFQRSDPNASRVMGSCNGVVCLINF-NVACLWNPC 1006
               + H+   E D  S D+V ++D+P      N  +V+GSCNG++C+ N  +    WNP 
Sbjct: 56   ---RQHSRLYELDLNSMDRVKELDHPLMCYS-NRIKVLGSCNGLLCICNIADDIAFWNPT 111

Query: 1005 TGEDKFVTFE----KEFAMDNSC-------LYGFGYDSSTNDYKLVQLLC------SSNS 877
              + + +  E    KE   +N+        +YGFGYDS+T+DYKLV +         S  
Sbjct: 112  IRKHRIIPSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFD 171

Query: 876  TGVLVYSLKDLSCSLISTIPNMIADAGLKPLGVLLNGVLHWFVYGHAENDAFKVVISFDI 697
            + V +Y+++      + ++P  +  A  + +GV ++G LHW V    E ++  ++++FD+
Sbjct: 172  SHVKIYTMRTDVWKTLPSMPYALCCA--RTMGVFVSGALHWVVTRDLEPESRDLIVAFDL 229

Query: 696  GEKVSGEVPGPADVSTLSDITLGKLGGQLCIVGQNNFSAIEIRVMKNYGVRDSWFKLIAI 517
              +V  EV  P  V    D+ +  L G LCI+        ++ VM+ YG  DSW K+  +
Sbjct: 230  RFEVFREVALPGTVDGKFDMDVALLRGMLCIIENRGSDGFDVWVMREYGSHDSWCKMFTV 289

Query: 516  GEGVYQSVSDVVDVRNLISPLCFAKNGE 433
            G+       DV  +++L  PL +++NG+
Sbjct: 290  GQ-----PRDVKLMKSL-KPLGYSRNGD 311


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  124 bits (312), Expect = 4e-26
 Identities = 102/372 (27%), Positives = 169/372 (45%), Gaps = 16/372 (4%)
 Frame = -3

Query: 1350 RCVCKPWCSSIADSTFIKKHLTRAIERDSVDLLIFNIAISSEKWFVKRDIHGNEIMSFPF 1171
            R V KPWC+ I    F+K HL  +++             SS  + + R       M F  
Sbjct: 25   RSVSKPWCALIDGPNFVKLHLKHSMDT------------SSNLYIILRTTSHVHYMDFEQ 72

Query: 1170 YQMHTHCVEGDSFDKVVKIDNPFQRSDPNASRVMGSCNGVVCLINF-NVACLWNPCTGED 994
              +   CV       + ++++P    + +  +V+GS NG++C+ N  +   +WNP T + 
Sbjct: 73   NLVLNDCVT------LKELNHPLMCYN-HGIKVLGSVNGLLCISNVVDDIAVWNPSTRKH 125

Query: 993  KFVTFE----KEFAMDNSC---LYGFGYDSSTNDYKLVQLLC------SSNSTGVLVYSL 853
            + V F     K +    SC   ++GFGYDS  +DYKLV++         S  + V VYSL
Sbjct: 126  RVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSL 185

Query: 852  KDLSCSLISTIPNMIADAGLKPLGVLLNGVLHWFVYGHAENDAFKVVISFDIGEKVSGEV 673
            +  S   I  +P  +   G    GV  NG LHW V  + E++   +V++ D+G +   EV
Sbjct: 186  RKQSWRRIGDMPYCVHYPGAN--GVFANGALHWVVGENPESNVANIVVALDLGVEDYREV 243

Query: 672  PGPADVSTLSDITLGKLGGQLCIVGQNNFSAIEIRVMKNYGVRDSWFKLIAIGEGVYQSV 493
              P        I LG L G LC +       +++ +MK YGV++SW KL ++ +      
Sbjct: 244  LQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQ------ 297

Query: 492  SDVVDVRNLISPLCFAKNGE--XXXXXXXXXXLHDPKKKATRTLGIQGLPTDNRIGRIVA 319
             +V+     + PL ++K+G+             +D K+K  +   I G+P        V 
Sbjct: 298  YEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKN-RIPGIPYSFEADTFVE 356

Query: 318  HVASLVPLKSVD 283
             + S+ P + +D
Sbjct: 357  SLISVSPNRHLD 368


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  119 bits (299), Expect = 1e-24
 Identities = 105/366 (28%), Positives = 162/366 (44%), Gaps = 30/366 (8%)
 Frame = -3

Query: 1356 RFRCVCKPWCSSIADSTFIKKHLTRAIERDSVDLLIFNIAISSEKWFVKRDIHGNEIMSF 1177
            RFRCV K WC  I    FI  HL R+ +  +   LI   A +                  
Sbjct: 22   RFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATN------------------ 63

Query: 1176 PFYQMHTHCVEGDSFDKVVKIDNPFQRSDPNASRVMGSCNGVVCLIN--FNVACLWNPCT 1003
                + T  ++   F  +   +NP  +SD  A+ VMGSCNG++ L+N  F++A L+NP T
Sbjct: 64   ----LCTVDLDSPDFTSIELKNNPL-KSDDCATEVMGSCNGLLALLNSDFSIA-LYNPST 117

Query: 1002 GEDKFVT---FEKEFAMDNSCL------YGFGYDSSTNDYKLVQLLCSSNSTG------- 871
             E K +     E    +D+S +      YGFG+D    DYK+V+ +     +        
Sbjct: 118  REKKMIPVSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCE 177

Query: 870  VLVYSLKDLSCSLISTIP---NMIADAGLKP-----LGVLLNGVLHW--FVYGHAENDAF 721
            V VYSLK  S   I   P     I      P      GV  N  +HW   V G  + +  
Sbjct: 178  VKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGS 237

Query: 720  KVVISFDIGEKVSGEVPGPADVSTLSDITLGKLGGQLCIVGQNNFSAIEIRVMKNYGVRD 541
             ++++FD+G +    +P P   S   ++ +G LGG LC+    N   +EI VMK YGV++
Sbjct: 238  DLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKE 297

Query: 540  SWFKLIAIGEGVYQSVSDVVDVRNLISPLCFAKNGE--XXXXXXXXXXLHDPKKKATRTL 367
            SW  L  +     Q  +  +  R    PL ++K G+             +D +++ ++ +
Sbjct: 298  SWTHLCTV-IAQLQVKAFWLHAR----PLAYSKGGDKILLELDNRFFVWYDLRRRKSKII 352

Query: 366  GIQGLP 349
             I+G P
Sbjct: 353  RIRGAP 358


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 389

 Score =  119 bits (298), Expect = 2e-24
 Identities = 101/371 (27%), Positives = 168/371 (45%), Gaps = 17/371 (4%)
 Frame = -3

Query: 1350 RCVCKPWCSSIADSTFIKKHLTRAIERDSVDLLIFNIAISSEKWFVKRDIHGNEIMSFPF 1171
            RCV K W + I   TFI  HL  +IE         N++I          +  +E+ S  F
Sbjct: 25   RCVSKRWRTLIDSPTFIYLHLNHSIESPC------NLSII---------LKSSELYSLSF 69

Query: 1170 YQMHTHCVEGDSFDKVVKIDNPFQRSDPNASRVMGSCNGVVCLINF-NVACLWNPCTGED 994
                      D  D +  +D+P    + +  +++GSCNG++C+ N  +   LWNP     
Sbjct: 70   ----------DLLDNIQPLDHPLMCYN-HGVKILGSCNGLLCICNIVDDIALWNPSIRAH 118

Query: 993  KFVTF-----EKEFAMDNSC---LYGFGYDSSTNDYKLVQLLC------SSNSTGVLVYS 856
            + V +     ++ F M  SC   ++GFGYD S +DYKLV++         S  + V V+S
Sbjct: 119  RVVPYLPVELKRYFGMC-SCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFS 177

Query: 855  LKDLSCSLISTIPNMIADAGLKPLGVLLNGVLHWFVYGHAENDAFKVVISFDIGEKVSGE 676
            L+  S   I+ +P  +   G    G+  NG LHW V    ++     +++ D+G +    
Sbjct: 178  LRKNSWRRIADMPYCVLYPGEN--GIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHV 235

Query: 675  VPGPADVSTLSDITLGKLGGQLCIVGQNNFSAIEIRVMKNYGVRDSWFKLIAIGEGVYQS 496
            VP P  V    ++ +G L G L ++       +++ VM+ Y V++SW KL ++       
Sbjct: 236  VPKPEFVDMNCNMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKESWSKLFSVAR----- 290

Query: 495  VSDVVDVRNLISPLCFAKNGE--XXXXXXXXXXLHDPKKKATRTLGIQGLPTDNRIGRIV 322
              +V+ +   + PL ++K+G              +D K+K    + IQG+P         
Sbjct: 291  -LEVIGILRSLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVVNVWIQGVPI---TFEAE 346

Query: 321  AHVASLVPLKS 289
              V SLVPL +
Sbjct: 347  ICVGSLVPLNA 357


>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 358

 Score =  114 bits (284), Expect = 8e-23
 Identities = 88/284 (30%), Positives = 136/284 (47%), Gaps = 6/284 (2%)
 Frame = -3

Query: 1356 RFRCVCKPWCSSIADSTFIKKHLTRAIERDSVDLLIFNIAISSEKWFVKRDIHGNEIMSF 1177
            RF+ VCK W   I+D  FI  HL+ A +         N  I+  +W +        + SF
Sbjct: 23   RFKVVCKSWWLLISDPHFISMHLSLATK---------NNCINCHRWRLC-------LTSF 66

Query: 1176 PFYQMHTHCVEGDSFDKVVKIDNPFQRSDPNASRVMGSCNGVVCLINF-NVACLWNPCTG 1000
                +++   E       +K+  P +    +  + +GSCNG++C+ +   V  L NP T 
Sbjct: 67   SLPSVYSVGYEASDRAIAIKLGYPLKSDCYDEVKFIGSCNGLLCVASEPGVLLLLNPSTR 126

Query: 999  EDKFVTF---EKEFAMDN-SCLYGFGYDSSTNDYKLVQLLCSSNSTGVLVYSLKDLSCSL 832
              + +      + F   +   +YGFGY  S NDYKLV++ C      V VYS+K+ S   
Sbjct: 127  AAQEIPRLGNRRPFTQSSLPYMYGFGYAHSINDYKLVKISCRGC---VFVYSVKENSWRS 183

Query: 831  ISTIPNMIADAGLKPLGVLLNGVLHWFVYGHAENDAFKVVISFDIGEKVSGEVPGPADVS 652
            +   P  I    L P G+ LNG +HW V    ++   +++ +FD+ E+   +VP P  V 
Sbjct: 184  VGGFPYSIL--ALDP-GIQLNGAIHWVVSRSKDSTKSQIIGAFDLVEEKFWDVPPPVSVH 240

Query: 651  TLSDITLGKLGGQLCIV-GQNNFSAIEIRVMKNYGVRDSWFKLI 523
                I  G  G  LCI+ G +  S  +  VMK YG+RDSW K++
Sbjct: 241  NFYGI--GVFGECLCILPGSDVTSHNDFWVMKRYGIRDSWTKVV 282