BLASTX nr result

ID: Cimicifuga21_contig00024033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024033
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143440.1| PREDICTED: uncharacterized protein LOC101223...   102   2e-20
ref|XP_002274187.2| PREDICTED: uncharacterized protein LOC100241...   102   3e-20
emb|CBI18818.3| unnamed protein product [Vitis vinifera]              102   3e-20
dbj|BAE71249.1| hypothetical protein [Trifolium pratense]              99   3e-19
ref|XP_002533519.1| conserved hypothetical protein [Ricinus comm...    95   7e-18

>ref|XP_004143440.1| PREDICTED: uncharacterized protein LOC101223185 [Cucumis sativus]
           gi|449499810|ref|XP_004160923.1| PREDICTED:
           uncharacterized protein LOC101224095 [Cucumis sativus]
          Length = 612

 Score =  102 bits (255), Expect = 2e-20
 Identities = 53/93 (56%), Positives = 67/93 (72%), Gaps = 5/93 (5%)
 Frame = -2

Query: 266 ISESSSSMDANAFASSNNSRYPQVQFRQQQAASMANLHAQSGHQFKQLSPMQ-----TQN 102
           +  +   MD NA  ++ N R+PQ+QFRQQQ A+M+N+HA  G+QF+Q+  MQ     T N
Sbjct: 515 VENTELPMDGNAL-NALNIRHPQLQFRQQQIAAMSNIHASPGNQFRQIPSMQMPQIQTPN 573

Query: 101 NVTVRAPPVKVEGFSELMGGDTTSKHDSEEYKL 3
              VRAPPVKVEGF ELMGGDT+SKHDSEE +L
Sbjct: 574 TNVVRAPPVKVEGFQELMGGDTSSKHDSEEARL 606


>ref|XP_002274187.2| PREDICTED: uncharacterized protein LOC100241274, partial [Vitis
           vinifera]
          Length = 229

 Score =  102 bits (254), Expect = 3e-20
 Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
 Frame = -2

Query: 257 SSSSMDANAFASSNNSRYPQVQFRQQQAASMANLHAQSGHQFKQLSPMQ-----TQNNVT 93
           S   +D+NA+   NN    Q+QFRQQQ A+M+NLHAQ G+QF+QL+ +Q     TQN   
Sbjct: 138 SELPLDSNAY---NNINTRQIQFRQQQIAAMSNLHAQPGNQFRQLASLQIPQIQTQNMSM 194

Query: 92  VRAPPVKVEGFSELMGGDTTSKHDSEEYKL 3
           VRAPPVKVEGF ELMGGD T KHDSEE KL
Sbjct: 195 VRAPPVKVEGFQELMGGDATMKHDSEENKL 224


>emb|CBI18818.3| unnamed protein product [Vitis vinifera]
          Length = 256

 Score =  102 bits (254), Expect = 3e-20
 Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
 Frame = -2

Query: 257 SSSSMDANAFASSNNSRYPQVQFRQQQAASMANLHAQSGHQFKQLSPMQ-----TQNNVT 93
           S   +D+NA+   NN    Q+QFRQQQ A+M+NLHAQ G+QF+QL+ +Q     TQN   
Sbjct: 165 SELPLDSNAY---NNINTRQIQFRQQQIAAMSNLHAQPGNQFRQLASLQIPQIQTQNMSM 221

Query: 92  VRAPPVKVEGFSELMGGDTTSKHDSEEYKL 3
           VRAPPVKVEGF ELMGGD T KHDSEE KL
Sbjct: 222 VRAPPVKVEGFQELMGGDATMKHDSEENKL 251


>dbj|BAE71249.1| hypothetical protein [Trifolium pratense]
          Length = 561

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 6/96 (6%)
 Frame = -2

Query: 272 ENISESSSSMDANAFASSNNSRYPQVQFRQQQAASMANLHAQSGHQFKQL-SP----MQT 108
           EN S+  S  D NAF    NSR+PQ+QFRQQQ A+M+N H QS  Q++Q+ SP    MQ+
Sbjct: 466 ENTSDIPS--DGNAF----NSRHPQMQFRQQQLAAMSNFHPQSNTQYRQMGSPQIPQMQS 519

Query: 107 QNNVT-VRAPPVKVEGFSELMGGDTTSKHDSEEYKL 3
           QNN++ VRAPPVKVEGFSELMG  ++SKHDSEE +L
Sbjct: 520 QNNISMVRAPPVKVEGFSELMGSPSSSKHDSEENRL 555


>ref|XP_002533519.1| conserved hypothetical protein [Ricinus communis]
           gi|223526616|gb|EEF28863.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 573

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/90 (57%), Positives = 65/90 (72%), Gaps = 5/90 (5%)
 Frame = -2

Query: 257 SSSSMDANAFASSNNSRYPQVQFRQQQAASMANLHAQSGHQFKQLSPMQ-----TQNNVT 93
           S   MD NAF +  +SR+PQ+QFRQQQ A++++L AQS +QF+QL+ MQ     + N   
Sbjct: 479 SELPMDGNAF-NPMHSRHPQMQFRQQQLAAISSLQAQSSNQFRQLASMQVPQVQSPNMGI 537

Query: 92  VRAPPVKVEGFSELMGGDTTSKHDSEEYKL 3
           VRAPPVKVEGF ELMGGD + KHD EE KL
Sbjct: 538 VRAPPVKVEGFQELMGGDASVKHDPEENKL 567


Top