BLASTX nr result

ID: Cimicifuga21_contig00024031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024031
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258...    87   1e-15
emb|CBI16338.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002328309.1| chromatin remodeling complex subunit [Populu...    79   3e-13
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    78   8e-13
gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana]              65   6e-09

>ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera]
          Length = 1534

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/83 (54%), Positives = 56/83 (67%)
 Frame = +1

Query: 1   KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180
           K L LAK D  L+SN+QNI+ STSH LL+WGA +LF KL++FH    P S ++  SEQS 
Sbjct: 440 KSLILAKHDMALDSNLQNISRSTSHMLLMWGASYLFNKLEKFHGSDAPDSRTDTSSEQSL 499

Query: 181 LNEVVQELLSLLPNNAEINDTKN 249
           L  V+QELL LLP+N    D  N
Sbjct: 500 LKGVMQELLILLPHNGANIDLSN 522


>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/83 (54%), Positives = 56/83 (67%)
 Frame = +1

Query: 1    KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180
            K L LAK D  L+SN+QNI+ STSH LL+WGA +LF KL++FH    P S ++  SEQS 
Sbjct: 1120 KSLILAKHDMALDSNLQNISRSTSHMLLMWGASYLFNKLEKFHGSDAPDSRTDTSSEQSL 1179

Query: 181  LNEVVQELLSLLPNNAEINDTKN 249
            L  V+QELL LLP+N    D  N
Sbjct: 1180 LKGVMQELLILLPHNGANIDLSN 1202


>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222837824|gb|EEE76189.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1996

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = +1

Query: 1   KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180
           KVL +A+QD TL+ N+Q IN   SH LL+WG  +LF KL EF+ G  P+S   +LSEQS 
Sbjct: 657 KVLIVARQDKTLDRNLQRINQGASHMLLMWGVSYLFDKLSEFNCGNDPASSGTLLSEQSH 716

Query: 181 LNEVVQELLSLL 216
           + +V+QE L+++
Sbjct: 717 MKDVIQEFLTIV 728


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/83 (45%), Positives = 55/83 (66%)
 Frame = +1

Query: 1    KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180
            KVL +A+QD TLES++ +I+ + S  LL+WGA +LF+KL EFH G   +S  N L EQS 
Sbjct: 1024 KVLIIARQDKTLESSLHSISRAASDMLLMWGASYLFEKLSEFHCGNDTASSGNTLFEQSH 1083

Query: 181  LNEVVQELLSLLPNNAEINDTKN 249
            L +V+QE L+++    + N   N
Sbjct: 1084 LKDVIQEFLTIIIQKGKDNTPSN 1106


>gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana]
          Length = 2254

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1    KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180
            K L LA+Q+      ++N+N S +H LL+WGA +LF KLD FHS  TP   S +  EQS 
Sbjct: 929  KALILARQNKRQNKAVENLNRSLTHALLMWGASYLFDKLDHFHSSETPD--SGVSFEQSI 986

Query: 181  LNEVVQELLSLLPN-NAEINDTK 246
            ++ V+ E  S+L +   E N+ K
Sbjct: 987  MDGVIHEFSSILSSKGGEENEVK 1009


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