BLASTX nr result
ID: Cimicifuga21_contig00024031
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00024031 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258... 87 1e-15 emb|CBI16338.3| unnamed protein product [Vitis vinifera] 87 1e-15 ref|XP_002328309.1| chromatin remodeling complex subunit [Populu... 79 3e-13 ref|XP_002318937.1| chromatin remodeling complex subunit [Populu... 78 8e-13 gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana] 65 6e-09 >ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera] Length = 1534 Score = 87.0 bits (214), Expect = 1e-15 Identities = 45/83 (54%), Positives = 56/83 (67%) Frame = +1 Query: 1 KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180 K L LAK D L+SN+QNI+ STSH LL+WGA +LF KL++FH P S ++ SEQS Sbjct: 440 KSLILAKHDMALDSNLQNISRSTSHMLLMWGASYLFNKLEKFHGSDAPDSRTDTSSEQSL 499 Query: 181 LNEVVQELLSLLPNNAEINDTKN 249 L V+QELL LLP+N D N Sbjct: 500 LKGVMQELLILLPHNGANIDLSN 522 >emb|CBI16338.3| unnamed protein product [Vitis vinifera] Length = 1452 Score = 87.0 bits (214), Expect = 1e-15 Identities = 45/83 (54%), Positives = 56/83 (67%) Frame = +1 Query: 1 KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180 K L LAK D L+SN+QNI+ STSH LL+WGA +LF KL++FH P S ++ SEQS Sbjct: 1120 KSLILAKHDMALDSNLQNISRSTSHMLLMWGASYLFNKLEKFHGSDAPDSRTDTSSEQSL 1179 Query: 181 LNEVVQELLSLLPNNAEINDTKN 249 L V+QELL LLP+N D N Sbjct: 1180 LKGVMQELLILLPHNGANIDLSN 1202 >ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222837824|gb|EEE76189.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1996 Score = 79.3 bits (194), Expect = 3e-13 Identities = 36/72 (50%), Positives = 51/72 (70%) Frame = +1 Query: 1 KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180 KVL +A+QD TL+ N+Q IN SH LL+WG +LF KL EF+ G P+S +LSEQS Sbjct: 657 KVLIVARQDKTLDRNLQRINQGASHMLLMWGVSYLFDKLSEFNCGNDPASSGTLLSEQSH 716 Query: 181 LNEVVQELLSLL 216 + +V+QE L+++ Sbjct: 717 MKDVIQEFLTIV 728 >ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222857313|gb|EEE94860.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2283 Score = 77.8 bits (190), Expect = 8e-13 Identities = 38/83 (45%), Positives = 55/83 (66%) Frame = +1 Query: 1 KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180 KVL +A+QD TLES++ +I+ + S LL+WGA +LF+KL EFH G +S N L EQS Sbjct: 1024 KVLIIARQDKTLESSLHSISRAASDMLLMWGASYLFEKLSEFHCGNDTASSGNTLFEQSH 1083 Query: 181 LNEVVQELLSLLPNNAEINDTKN 249 L +V+QE L+++ + N N Sbjct: 1084 LKDVIQEFLTIIIQKGKDNTPSN 1106 >gb|AAF79839.1|AC026875_19 T6D22.14 [Arabidopsis thaliana] Length = 2254 Score = 65.1 bits (157), Expect = 6e-09 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%) Frame = +1 Query: 1 KVLSLAKQDTTLESNIQNINPSTSHTLLLWGAYFLFQKLDEFHSGCTPSSCSNILSEQSF 180 K L LA+Q+ ++N+N S +H LL+WGA +LF KLD FHS TP S + EQS Sbjct: 929 KALILARQNKRQNKAVENLNRSLTHALLMWGASYLFDKLDHFHSSETPD--SGVSFEQSI 986 Query: 181 LNEVVQELLSLLPN-NAEINDTK 246 ++ V+ E S+L + E N+ K Sbjct: 987 MDGVIHEFSSILSSKGGEENEVK 1009