BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024024
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]           82   3e-14
gb|EIW62512.1| ubiquitin-domain-containing protein [Trametes ver...    79   3e-13
ref|XP_003607659.1| Ubiquitin [Medicago truncatula] gi|355508714...    79   3e-13
ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana] gi|1222...    78   9e-13
ref|XP_003557529.1| PREDICTED: polyubiquitin 3-like [Brachypodiu...    77   1e-12

>gb|EIW62509.1| ubiquitin [Trametes versicolor FP-101664 SS1]
          Length = 397

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/100 (44%), Positives = 64/100 (64%)
 Frame = +2

Query: 59  QVHVKMPQIGKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYN 238
           Q+ VK P  GKTITL+VD  DTI  VK  I + EG+ P+Q  LI+ G++L  ++ ++ YN
Sbjct: 2   QISVKNPTTGKTITLEVDSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSHRTVSDYN 61

Query: 239 IREGSTIYALFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
           +R+GST++ +FR  D MQ+ V      + I L+VK   TI
Sbjct: 62  LRKGSTVFLMFRVLDGMQIFVK-TLSGKTITLEVKPLDTI 100



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/81 (41%), Positives = 54/81 (66%)
 Frame = +2

Query: 59  QVHVKMPQIGKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYN 238
           Q+ VK   IGKT+TL+ +  DT+  VK KIQ+ +G  P +  LI+ G++LVD + L+ YN
Sbjct: 297 QIFVKT-MIGKTVTLEAESFDTVENVKAKIQDKDGNPPHKQCLIFAGKQLVDGRTLSDYN 355

Query: 239 IREGSTIYALFRFGDDMQVNV 301
           I++ ST++ ++R    MQ +V
Sbjct: 356 IQKESTLHVVWRQFGGMQPSV 376



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKTITL+V   DTI  +K KIQ  EG  P Q  + +  E+L D++ L+ YNI+  ST+  
Sbjct: 87  GKTITLEVKPLDTIRNIKAKIQAKEGNPPDQQRIKFAEEQLEDDRTLSDYNIQWNSTLQL 146

Query: 266 LFRF 277
           + RF
Sbjct: 147 VGRF 150



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/102 (37%), Positives = 57/102 (55%)
 Frame = +2

Query: 53  RTQVHVKMPQIGKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLAT 232
           R Q+ VK    G+T  L+V   DTI  VK K ++ EG  P+Q  LI+ G+EL D+  L+ 
Sbjct: 149 RFQIFVKTVA-GETTPLEVVSSDTIKDVKEKYRDKEGAVPAQQRLIFAGKELEDDCILSD 207

Query: 233 YNIREGSTIYALFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
           Y I++ ST++ + R    MQ+ V      + I ++ KS  TI
Sbjct: 208 YGIQKDSTVHLVLRL-PGMQIFVK-SYTGKTITIEAKSSDTI 247


>gb|EIW62512.1| ubiquitin-domain-containing protein [Trametes versicolor FP-101664
           SS1]
          Length = 769

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/99 (41%), Positives = 62/99 (62%)
 Frame = +2

Query: 62  VHVKMPQIGKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNI 241
           + VK P +GKTI L+ D  DTI  VK  I + EG+ P+Q  LI+ G++L   + ++ YN+
Sbjct: 382 IFVKNPTVGKTIALEADSSDTIENVKAMIHDKEGVAPNQQRLIFAGKQLDSRRTVSDYNM 441

Query: 242 REGSTIYALFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
           R+GST++ +FR  D MQ++V      + I L+VK   TI
Sbjct: 442 RKGSTVFLIFRVLDGMQISVK-TLSGKTITLEVKPLDTI 479



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/91 (45%), Positives = 58/91 (63%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKTITL+V+  DTI  VK KIQ+ EGI P Q  LI+ G++L D + L+ YNI++ ST++ 
Sbjct: 133 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 192

Query: 266 LFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
           + R    MQ+ V      + I L+V+S  TI
Sbjct: 193 VLRLRGGMQIFVK-TLTGKTITLEVESSDTI 222



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/62 (48%), Positives = 44/62 (70%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKTITL+V+  DTI   K KIQ+ EGI P Q  LI+ G++L D + L+ YNI++ ST++ 
Sbjct: 209 GKTITLEVESSDTIDNSKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 268

Query: 266 LF 271
           ++
Sbjct: 269 VW 270



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKT+TL+ +  DT+  VK KI + EG  P    LI+ G++LVD + L+ Y+I   ST++ 
Sbjct: 685 GKTVTLEAEPFDTVENVKAKIHDKEGCPPDLQRLIFAGKQLVDGRTLSDYSIPNNSTLHL 744

Query: 266 LFR 274
           ++R
Sbjct: 745 VYR 747



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEG-------ITPSQHSLIYLGEELVDNQFLATYNIR 244
           GKTITL+V+  DTI  VK KIQ+ EG       + P Q  LI+ G++L D + L+ Y+I+
Sbjct: 55  GKTITLEVESSDTIDNVKAKIQDKEGTDIPSASLPPDQQRLIFAGKQLEDGRTLSDYSIQ 114

Query: 245 EGSTIY 262
           + ST++
Sbjct: 115 KESTLH 120



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/91 (39%), Positives = 50/91 (54%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKTITL+V   DTI ++K KIQ  EG  P Q  + +  +EL +++ L  YNI+  ST+  
Sbjct: 466 GKTITLEVKPLDTIGSIKTKIQAKEGTPPDQQCVKFADDELEEDRTLLDYNIQWNSTLQL 525

Query: 266 LFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
           + RF    Q+ V          L+VKS  TI
Sbjct: 526 VGRF----QIFVKRALTRETTPLEVKSSDTI 552


>ref|XP_003607659.1| Ubiquitin [Medicago truncatula] gi|355508714|gb|AES89856.1|
           Ubiquitin [Medicago truncatula]
          Length = 259

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/119 (42%), Positives = 72/119 (60%)
 Frame = +2

Query: 2   LASSSNSIIDMFLDSGVRTQVHVKMPQIGKTITLDVDIRDTIHTVKGKIQNMEGITPSQH 181
           L S ++S  D+F+    + Q+ VK    GKTITL+V+  DTI  VK KIQ+ EGI P Q 
Sbjct: 11  LISIASSDYDVFVFQCEQMQIFVKT-LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQ 69

Query: 182 SLIYLGEELVDNQFLATYNIREGSTIYALFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
            LI+ G++L D + LA YNI++ ST++ + R    MQ+ V      + I L+V+S  TI
Sbjct: 70  RLIFAGKQLEDGRILADYNIQKESTLHLVLRLRGGMQIFVK-TLTGKTITLEVESSDTI 127



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/91 (45%), Positives = 57/91 (62%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKTITL+V+  DTI  VK KIQ+ EGI P Q  LI+ G++L D + L  YNI++ ST++ 
Sbjct: 114 GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLGDYNIQKESTLHL 173

Query: 266 LFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
           + R    MQ+ V+     + I L V+S  TI
Sbjct: 174 VLRLRGGMQIFVN-TLTGKTITLDVESSDTI 203


>ref|NP_564675.1| polyubiquitin 12 [Arabidopsis thaliana]
           gi|122213849|sp|Q3E7K8.1|UBQ12_ARATH RecName:
           Full=Polyubiquitin 12; Contains: RecName:
           Full=Ubiquitin-related 1; Contains: RecName:
           Full=Ubiquitin-related 2; Contains: RecName:
           Full=Ubiquitin-related 3; Flags: Precursor
           gi|332195060|gb|AEE33181.1| polyubiquitin 12
           [Arabidopsis thaliana]
          Length = 230

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 43/91 (47%), Positives = 59/91 (64%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKT  L+V+  DTI  VK KIQ++EGI P QH LI+ G++L D + LA YN++E ST++ 
Sbjct: 10  GKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHL 69

Query: 266 LFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
           L RF   MQ+ V      + I L+V+S  TI
Sbjct: 70  LLRFRGGMQIFVK-TLTGKTITLEVESSDTI 99



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/91 (45%), Positives = 58/91 (63%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKTITL+V+  DTI  +K KIQ+ EGI P Q  LI+ G++L D + LA YNI++ ST++ 
Sbjct: 86  GKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHL 145

Query: 266 LFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
           + R    MQ+ V      + I L+V+S  TI
Sbjct: 146 VLRLRGGMQIFVK-TLTGKTITLEVESSDTI 175



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/63 (50%), Positives = 45/63 (71%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKTITL+V+  DTI  VK KIQ+ EGI+P Q  LI+ G++  D + LA YNI++ ST++ 
Sbjct: 162 GKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHL 221

Query: 266 LFR 274
           + R
Sbjct: 222 VLR 224


>ref|XP_003557529.1| PREDICTED: polyubiquitin 3-like [Brachypodium distachyon]
          Length = 151

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/91 (46%), Positives = 57/91 (62%)
 Frame = +2

Query: 86  GKTITLDVDIRDTIHTVKGKIQNMEGITPSQHSLIYLGEELVDNQFLATYNIREGSTIYA 265
           GKTITL+V+  DTI  VK KIQ+ EGI P Q  LI+ G++L D + LA YNI++ ST++ 
Sbjct: 10  GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLADGRTLADYNIQKESTLHL 69

Query: 266 LFRFGDDMQVNVSLERVERIINLKVKSWYTI 358
           + R    MQ+ V        I L+V+  YTI
Sbjct: 70  VLRLRGGMQIIVQHYVSMTTITLEVEPLYTI 100