BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024013
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    58   7e-07
ref|XP_002307225.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002332290.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/75 (37%), Positives = 38/75 (50%)
 Frame = +2

Query: 2   ALINDDFRRLDRKVQKGGDSSDVLFVRGRKKDKNSGPSKGANNHSRSKSKGKKKDLDPDE 181
           AL + + R+ D+   K   S + L  RGR++ +            R  SK K + +  DE
Sbjct: 119 ALYSHELRKQDKMKTKSTTSEEALVARGRQQSQTK--------ERRGMSKSKGRAVAKDE 170

Query: 182 CGFCHEMGHWVKDCP 226
           C FCHE GHW KDCP
Sbjct: 171 CAFCHEKGHWKKDCP 185


>ref|XP_002307225.1| predicted protein [Populus trichocarpa] gi|222856674|gb|EEE94221.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
 Frame = +2

Query: 2   ALINDDFRRLDRKVQKGGDSSDVLFVRGRKKDKNSGPSKGANNHSRSKSKGKKKD---LD 172
           AL+N+++R+ D+ V K   +S+ L VRGR   K           SRSKS+G+  +   L 
Sbjct: 196 ALVNNEYRKKDQIVHKES-TSEALTVRGRTNPKRFR----GRGRSRSKSRGESSNRRYLA 250

Query: 173 PDECGFCHEMGHWVKDCP 226
            +EC FCH+  HW KDCP
Sbjct: 251 KNECAFCHKKRHWKKDCP 268


>ref|XP_002332290.1| predicted protein [Populus trichocarpa] gi|222832452|gb|EEE70929.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = +2

Query: 2   ALINDDFRRLDRKVQKGGDSSDVLFVRGRKKDKNSGPSKGANNHSRSKSKGKKKD---LD 172
           AL+N+++R+ D+ V K   + + L VRGR   +           SRSKS+G+  +   L 
Sbjct: 137 ALVNNEYRKKDQIVHKES-TLEALTVRGRTNPRRFR----GQGRSRSKSRGESSNRRYLA 191

Query: 173 PDECGFCHEMGHWVKDCP 226
            DEC FCH+ GHW KD P
Sbjct: 192 KDECAFCHKKGHWKKDSP 209