BLASTX nr result

ID: Cimicifuga21_contig00024005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024005
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   197   6e-49
ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   193   1e-47
emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]   193   1e-47
ref|XP_004134079.1| PREDICTED: fatty acid oxidation complex subu...   172   3e-41
ref|XP_004168792.1| PREDICTED: fatty acid oxidation complex subu...   169   2e-40

>ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  197 bits (502), Expect = 6e-49
 Identities = 93/132 (70%), Positives = 110/132 (83%)
 Frame = -3

Query: 397 MCTLETRGNIFFLILTGTTDHRLSPTLISELRALFAQIRSEAKPGSVLITTAEGKFFSNG 218
           MCTLE RGN+F LILTG  +HRL PTL+  +R+  AQ++S+A PGS LITTA GKFFSNG
Sbjct: 1   MCTLEQRGNLFLLILTGDNEHRLGPTLVDSIRSALAQVKSQATPGSALITTAHGKFFSNG 60

Query: 217 FDLAWAQSTGPSNFRDRLHQISSNFKSLIADLLSLPLPTIAAVTGHAAAGGFLLAISHDY 38
            DL WAQ+ G S FRDRL+ + +NFK +IADLLSLP+PTIAAV+GHAAA GF+LAISHDY
Sbjct: 61  LDLPWAQAAGSSGFRDRLNHLVNNFKPIIADLLSLPMPTIAAVSGHAAAAGFMLAISHDY 120

Query: 37  VLMRNDRGVLYM 2
           VLM+NDR VLYM
Sbjct: 121 VLMKNDRSVLYM 132


>ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  193 bits (491), Expect = 1e-47
 Identities = 91/132 (68%), Positives = 109/132 (82%)
 Frame = -3

Query: 397 MCTLETRGNIFFLILTGTTDHRLSPTLISELRALFAQIRSEAKPGSVLITTAEGKFFSNG 218
           MCTLE RGN+FFL LTG  +HRL P+L   +R+  AQ++S+A PGS LITTA+GKFFSNG
Sbjct: 1   MCTLEQRGNLFFLTLTGDNEHRLGPSLFDSIRSALAQVKSQATPGSALITTAQGKFFSNG 60

Query: 217 FDLAWAQSTGPSNFRDRLHQISSNFKSLIADLLSLPLPTIAAVTGHAAAGGFLLAISHDY 38
            DLAWAQ+ G S+FRDRL  +   FK ++ADLLSLP+PTIAAV+GHAAA GF+LAISHDY
Sbjct: 61  LDLAWAQAAGSSSFRDRLSHLLDCFKPIVADLLSLPMPTIAAVSGHAAAAGFMLAISHDY 120

Query: 37  VLMRNDRGVLYM 2
           VLM+NDR VLYM
Sbjct: 121 VLMKNDRSVLYM 132


>emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]
          Length = 238

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/132 (69%), Positives = 108/132 (81%)
 Frame = -3

Query: 397 MCTLETRGNIFFLILTGTTDHRLSPTLISELRALFAQIRSEAKPGSVLITTAEGKFFSNG 218
           MCTLE RGN+F LILTG  +HRL PTL+  +R+  AQ++S+A PGS LITTA  KFFSNG
Sbjct: 1   MCTLEERGNLFLLILTGDNEHRLGPTLVDSIRSALAQVKSQATPGSALITTAHDKFFSNG 60

Query: 217 FDLAWAQSTGPSNFRDRLHQISSNFKSLIADLLSLPLPTIAAVTGHAAAGGFLLAISHDY 38
            DL WAQ+ G S FRDRL+ + +NFK +IADLLSLP+PTIAAV+GHAAA GF LAISHDY
Sbjct: 61  LDLPWAQAAGSSGFRDRLNHLVNNFKPIIADLLSLPMPTIAAVSGHAAAAGFRLAISHDY 120

Query: 37  VLMRNDRGVLYM 2
           VLM+NDR VLYM
Sbjct: 121 VLMKNDRSVLYM 132


>ref|XP_004134079.1| PREDICTED: fatty acid oxidation complex subunit alpha-like [Cucumis
           sativus]
          Length = 239

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/133 (62%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
 Frame = -3

Query: 397 MCTLETRGNIFFLILTGTTDHRLSPTLISELRALFAQIRSEAKPGSVLITTAEGKFFSNG 218
           MCT+E RGN F L LTG  DHRLSP+LI+ +    +Q++++A P SVLITT+ GKFFSNG
Sbjct: 1   MCTVEKRGNFFILTLTGDDDHRLSPSLINSILKALSQVKAQASPASVLITTSHGKFFSNG 60

Query: 217 FDLAWAQSTGP-SNFRDRLHQISSNFKSLIADLLSLPLPTIAAVTGHAAAGGFLLAISHD 41
           FDL WA S G  S  R RL+ +   FKS++A+L+SLP+PTIAA+TGHAAA GF LA+SHD
Sbjct: 61  FDLPWALSAGSVSAARHRLNHLIEIFKSVVAELISLPMPTIAAITGHAAAAGFTLALSHD 120

Query: 40  YVLMRNDRGVLYM 2
           Y++MR+DRGVLYM
Sbjct: 121 YLIMRSDRGVLYM 133


>ref|XP_004168792.1| PREDICTED: fatty acid oxidation complex subunit alpha-like [Cucumis
           sativus]
          Length = 239

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/133 (61%), Positives = 104/133 (78%), Gaps = 1/133 (0%)
 Frame = -3

Query: 397 MCTLETRGNIFFLILTGTTDHRLSPTLISELRALFAQIRSEAKPGSVLITTAEGKFFSNG 218
           MCT+E RGN F L LTG  DHRLSP+LI+ +    +Q++++A P SVLITT+ GKFFSN 
Sbjct: 1   MCTVEKRGNFFILTLTGDDDHRLSPSLINSILKALSQVKAQASPASVLITTSHGKFFSNS 60

Query: 217 FDLAWAQSTGP-SNFRDRLHQISSNFKSLIADLLSLPLPTIAAVTGHAAAGGFLLAISHD 41
           FDL WA S G  S  R RL+ +   FKS++A+L+SLP+PTIAA+TGHAAA GF LA+SHD
Sbjct: 61  FDLPWALSAGSVSAARHRLNHLIEIFKSVVAELISLPMPTIAAITGHAAAAGFTLALSHD 120

Query: 40  YVLMRNDRGVLYM 2
           Y++MR+DRGVLYM
Sbjct: 121 YLIMRSDRGVLYM 133


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