BLASTX nr result

ID: Cimicifuga21_contig00023986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023986
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280453.2| PREDICTED: putative ABC transporter B family...    70   1e-10
emb|CBI28004.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002514211.1| multidrug resistance protein 1, 2, putative ...    69   5e-10
ref|XP_003548594.1| PREDICTED: putative ABC transporter B family...    67   2e-09
ref|XP_002325023.1| multidrug/pheromone exporter, MDR family, AB...    65   4e-09

>ref|XP_002280453.2| PREDICTED: putative ABC transporter B family member 8-like [Vitis
            vinifera]
          Length = 1238

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/38 (89%), Positives = 38/38 (100%)
 Frame = +2

Query: 2    TIKKLDSIAFVAEGKVLERGTYAQLKSKKGAFFNLATL 115
            TIKKLDSIAFV+EGKV+ERGTYAQLKSK+GAFFNLA+L
Sbjct: 1199 TIKKLDSIAFVSEGKVVERGTYAQLKSKRGAFFNLASL 1236


>emb|CBI28004.3| unnamed protein product [Vitis vinifera]
          Length = 1009

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/38 (89%), Positives = 38/38 (100%)
 Frame = +2

Query: 2    TIKKLDSIAFVAEGKVLERGTYAQLKSKKGAFFNLATL 115
            TIKKLDSIAFV+EGKV+ERGTYAQLKSK+GAFFNLA+L
Sbjct: 970  TIKKLDSIAFVSEGKVVERGTYAQLKSKRGAFFNLASL 1007


>ref|XP_002514211.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223546667|gb|EEF48165.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1230

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/40 (80%), Positives = 39/40 (97%)
 Frame = +2

Query: 2    TIKKLDSIAFVAEGKVLERGTYAQLKSKKGAFFNLATLSS 121
            TIKKLDSIAFVA+GKV+E+GTY+QLK+K+GAFFNLATL +
Sbjct: 1191 TIKKLDSIAFVADGKVVEQGTYSQLKNKRGAFFNLATLQT 1230


>ref|XP_003548594.1| PREDICTED: putative ABC transporter B family member 8-like [Glycine
            max]
          Length = 1290

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/44 (72%), Positives = 39/44 (88%)
 Frame = +2

Query: 2    TIKKLDSIAFVAEGKVLERGTYAQLKSKKGAFFNLATLSSTDTN 133
            TIK+LDSIA+V+EGKVLE+GTYAQL+ K+GAFFNLA+L  T  N
Sbjct: 1195 TIKELDSIAYVSEGKVLEQGTYAQLRHKRGAFFNLASLKQTIYN 1238


>ref|XP_002325023.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222866457|gb|EEF03588.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1205

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/38 (81%), Positives = 37/38 (97%)
 Frame = +2

Query: 2    TIKKLDSIAFVAEGKVLERGTYAQLKSKKGAFFNLATL 115
            TIK LDSIAFVA+GKV+ERGTYAQLK+K+GAFF+LA+L
Sbjct: 1167 TIKNLDSIAFVADGKVVERGTYAQLKNKRGAFFDLASL 1204


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