BLASTX nr result

ID: Cimicifuga21_contig00023970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023970
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264983.1| PREDICTED: peroxisome biogenesis protein 12 ...   462   e-127
ref|XP_002319659.1| predicted protein [Populus trichocarpa] gi|2...   454   e-125
ref|XP_002325774.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002521990.1| conserved hypothetical protein [Ricinus comm...   444   e-122
ref|NP_001064809.1| Os10g0467200 [Oryza sativa Japonica Group] g...   442   e-122

>ref|XP_002264983.1| PREDICTED: peroxisome biogenesis protein 12 [Vitis vinifera]
            gi|302143588|emb|CBI22341.3| unnamed protein product
            [Vitis vinifera]
          Length = 393

 Score =  462 bits (1188), Expect = e-127
 Identities = 230/328 (70%), Positives = 254/328 (77%)
 Frame = -3

Query: 1231 HSLRTTEASFSESLYGLRRRAVKFKLSKENLRTESDDMLHSSGLGRHHKVISVAFLVVLP 1052
            HSLRTT+ASFSESLYGLRRRAV+ ++ K+N  ++S D++H SGL ++ K +SV FLVVLP
Sbjct: 66   HSLRTTDASFSESLYGLRRRAVRIRVKKDNTLSDSSDVIHHSGLEKYQKRLSVLFLVVLP 125

Query: 1051 YFKSKLHSIYNKEREASLQASLWGPSDASVDDSDYFDSGEVSHLPTGALSAEASRWTRIR 872
            YFKSKLHS+YNKEREA+LQASLWG  D   DD+DYF     S +PT A   E S   R+ 
Sbjct: 126  YFKSKLHSVYNKEREATLQASLWGHGDERFDDADYFSEERGSLIPTRASDVEVSVRARLT 185

Query: 871  KRIDAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHVLGIHVCRATGQELMDTX 692
            KR    IG  YPW+HAGNEGL+FAYQLLYLLDATGFYS GLH LGIHVCRATGQELMDT 
Sbjct: 186  KRFQKFIGIFYPWLHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQELMDTS 245

Query: 691  XXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTSLDYAQTGLIAAVFFFKMMEWWYQSAE 512
                          RGPPWLK LQ  LLSC YT LDYAQTGLIAAVFFFKMMEWWYQSAE
Sbjct: 246  SRISKIRSRERDRLRGPPWLKALQGALLSCTYTMLDYAQTGLIAAVFFFKMMEWWYQSAE 305

Query: 511  ERMSAPTVYXXXXXXXXPKVAEGGIPLPSDRTICPLCSQKRVNASVVADSGFVFCYPCIF 332
            ERMSAPTVY        PKVA+ GIPLPSDRTICPLCSQKR N SVVA SGFVFCY CIF
Sbjct: 306  ERMSAPTVYPPPPPPPPPKVAKEGIPLPSDRTICPLCSQKRTNPSVVAVSGFVFCYACIF 365

Query: 331  RYVSQYKRCPVTLMPTTVEQIRRLFHDM 248
            +YVSQYKRCP+TLM   V+QIRRLFHD+
Sbjct: 366  KYVSQYKRCPITLMLANVDQIRRLFHDV 393


>ref|XP_002319659.1| predicted protein [Populus trichocarpa] gi|222858035|gb|EEE95582.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  454 bits (1168), Expect = e-125
 Identities = 224/328 (68%), Positives = 253/328 (77%)
 Frame = -3

Query: 1231 HSLRTTEASFSESLYGLRRRAVKFKLSKENLRTESDDMLHSSGLGRHHKVISVAFLVVLP 1052
            HSLRTT+ASF+ESLYGLRRRAVK ++ KE+ R +S D +  SGL +H +++SV FLVVLP
Sbjct: 66   HSLRTTDASFAESLYGLRRRAVKIRVKKEDARPKSGDGIQHSGLEKHQRILSVVFLVVLP 125

Query: 1051 YFKSKLHSIYNKEREASLQASLWGPSDASVDDSDYFDSGEVSHLPTGALSAEASRWTRIR 872
            YFKSKLHSIYNKEREA LQASLWG  D +V+D++YF  G+ S +    L AEA+   R+ 
Sbjct: 126  YFKSKLHSIYNKEREARLQASLWGNGDETVEDAEYFSGGDASLVSGETLDAEATIRARLT 185

Query: 871  KRIDAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHVLGIHVCRATGQELMDTX 692
            K+I  I+ +CYPW+HA +EG++FAYQLLYLLDATGFYS GLH LGIHVCRATGQELMDT 
Sbjct: 186  KKIQKIVFSCYPWLHASSEGMSFAYQLLYLLDATGFYSFGLHALGIHVCRATGQELMDTS 245

Query: 691  XXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTSLDYAQTGLIAAVFFFKMMEWWYQSAE 512
                          RGPPWLKT Q  LLSC YT LDYAQTGLIAAVF FKMMEWWYQSAE
Sbjct: 246  SRISKIRSNERDRLRGPPWLKTFQGALLSCAYTMLDYAQTGLIAAVFIFKMMEWWYQSAE 305

Query: 511  ERMSAPTVYXXXXXXXXPKVAEGGIPLPSDRTICPLCSQKRVNASVVADSGFVFCYPCIF 332
            ERMSAPTVY        PKVA+ GIPLP DRTICPLCSQ R N SVV  SGFVFCY CIF
Sbjct: 306  ERMSAPTVYPPPPPPPPPKVAKEGIPLPPDRTICPLCSQMRANPSVVTISGFVFCYACIF 365

Query: 331  RYVSQYKRCPVTLMPTTVEQIRRLFHDM 248
            +YVSQY RCPVTLMP  V+ IRRLFHDM
Sbjct: 366  KYVSQYNRCPVTLMPANVDHIRRLFHDM 393


>ref|XP_002325774.1| predicted protein [Populus trichocarpa] gi|222862649|gb|EEF00156.1|
            predicted protein [Populus trichocarpa]
          Length = 388

 Score =  449 bits (1156), Expect = e-124
 Identities = 223/328 (67%), Positives = 250/328 (76%)
 Frame = -3

Query: 1231 HSLRTTEASFSESLYGLRRRAVKFKLSKENLRTESDDMLHSSGLGRHHKVISVAFLVVLP 1052
            HSLRTT+ASFSESLYGLRRR VK ++ KE++R  S D +  SGL +H +++SV FLVVLP
Sbjct: 66   HSLRTTDASFSESLYGLRRRTVKIRVKKEDVRPNSGDGIQHSGLEKHQRILSVVFLVVLP 125

Query: 1051 YFKSKLHSIYNKEREASLQASLWGPSDASVDDSDYFDSGEVSHLPTGALSAEASRWTRIR 872
            YFKSKL+SIYNKEREA LQASLWG  D +V+D++YF  GE S      +S E +   R+ 
Sbjct: 126  YFKSKLYSIYNKEREARLQASLWGNGDETVEDAEYFSGGEAS-----LVSRETTIRARLM 180

Query: 871  KRIDAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHVLGIHVCRATGQELMDTX 692
            K+I  I+  CYPW+HA NEG++FAYQLLYLLDATGFYS GLH LGIHVCRATGQELMDT 
Sbjct: 181  KKIQKILFVCYPWLHASNEGMSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQELMDTT 240

Query: 691  XXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTSLDYAQTGLIAAVFFFKMMEWWYQSAE 512
                           GPPWLK LQ  LLSC YT LDYAQTGLIAAVF FKMMEWWYQSAE
Sbjct: 241  SRISKIRSNERERLHGPPWLKALQGALLSCGYTMLDYAQTGLIAAVFIFKMMEWWYQSAE 300

Query: 511  ERMSAPTVYXXXXXXXXPKVAEGGIPLPSDRTICPLCSQKRVNASVVADSGFVFCYPCIF 332
            ERMSAPTVY        PKVA+ GIPLP DRTICPLCSQKR N SVV  SGFVFCY CIF
Sbjct: 301  ERMSAPTVYPPPPPPPAPKVAKEGIPLPPDRTICPLCSQKRANPSVVTISGFVFCYACIF 360

Query: 331  RYVSQYKRCPVTLMPTTVEQIRRLFHDM 248
            +Y+SQY RCPVTLMP  V+QIRRLFHDM
Sbjct: 361  KYLSQYNRCPVTLMPANVDQIRRLFHDM 388


>ref|XP_002521990.1| conserved hypothetical protein [Ricinus communis]
            gi|223538794|gb|EEF40394.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 393

 Score =  444 bits (1142), Expect = e-122
 Identities = 222/328 (67%), Positives = 249/328 (75%)
 Frame = -3

Query: 1231 HSLRTTEASFSESLYGLRRRAVKFKLSKENLRTESDDMLHSSGLGRHHKVISVAFLVVLP 1052
            HSLRTT+ASFSESLYGLRRR VK ++ K++ R    D +  SGL +  +++SVAFLVVLP
Sbjct: 66   HSLRTTDASFSESLYGLRRRGVKIQVKKKDARLNLGDGIELSGLQKRQRILSVAFLVVLP 125

Query: 1051 YFKSKLHSIYNKEREASLQASLWGPSDASVDDSDYFDSGEVSHLPTGALSAEASRWTRIR 872
            YFKSKL+S+YNKEREA LQASLWG      + +DYFD  + S +  G + +EA+   R+ 
Sbjct: 126  YFKSKLYSLYNKEREARLQASLWGDGGGPFEGTDYFDRDDGSLVSRGTMESEATIRARLT 185

Query: 871  KRIDAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHVLGIHVCRATGQELMDTX 692
            KRI  II ACYPW+HA +EGL+F YQLLYLLDATGFYS GLH LGIHVCRATGQELMDT 
Sbjct: 186  KRIQKIIFACYPWVHATSEGLSFTYQLLYLLDATGFYSLGLHALGIHVCRATGQELMDTS 245

Query: 691  XXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTSLDYAQTGLIAAVFFFKMMEWWYQSAE 512
                          RGPPWLKTLQ  LLSC Y  LDYAQTGLIAAVFFFKMMEWWYQSAE
Sbjct: 246  SRISKIRSRERERLRGPPWLKTLQGALLSCTYAVLDYAQTGLIAAVFFFKMMEWWYQSAE 305

Query: 511  ERMSAPTVYXXXXXXXXPKVAEGGIPLPSDRTICPLCSQKRVNASVVADSGFVFCYPCIF 332
            ERMSAPTVY        PKVA+ GIPLP DRTICPLC+QKR N SVV  SGFVFCYPCIF
Sbjct: 306  ERMSAPTVYPSPPPPPPPKVAKEGIPLPPDRTICPLCAQKRANPSVVTVSGFVFCYPCIF 365

Query: 331  RYVSQYKRCPVTLMPTTVEQIRRLFHDM 248
            +YVSQY RCPVTLM  T EQIRRLFHD+
Sbjct: 366  KYVSQYTRCPVTLMSATTEQIRRLFHDV 393


>ref|NP_001064809.1| Os10g0467200 [Oryza sativa Japonica Group] gi|78708797|gb|ABB47772.1|
            Pex2/Pex12 amino terminal region family protein,
            expressed [Oryza sativa Japonica Group]
            gi|113639418|dbj|BAF26723.1| Os10g0467200 [Oryza sativa
            Japonica Group] gi|215700971|dbj|BAG92395.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222612974|gb|EEE51106.1| hypothetical protein
            OsJ_31837 [Oryza sativa Japonica Group]
          Length = 394

 Score =  442 bits (1137), Expect = e-122
 Identities = 220/329 (66%), Positives = 248/329 (75%), Gaps = 1/329 (0%)
 Frame = -3

Query: 1231 HSLRTTEASFSESLYGLRRRAVKFKLSKENLRTESDDMLHSSGLGRHHKVISVAFLVVLP 1052
            HSLRTT+ SFSESLYGLRRR VK  + + +   ES+D  + S L +  KV+SV FLVVLP
Sbjct: 66   HSLRTTDGSFSESLYGLRRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVFLVVLP 125

Query: 1051 YFKSKLHSIYNKEREASLQASLWGPSDASVDDSDYF-DSGEVSHLPTGALSAEASRWTRI 875
            YFKSKL SIYNKEREA LQASLWG  D   D++D   D GE S     A + E S   RI
Sbjct: 126  YFKSKLQSIYNKEREARLQASLWGQGDVRFDEADLVSDQGETSQAQVEATTGEVSNMARI 185

Query: 874  RKRIDAIIGACYPWIHAGNEGLTFAYQLLYLLDATGFYSPGLHVLGIHVCRATGQELMDT 695
            +K   A+IG CYPWIHA NEGL+FAYQLLYLLD T FYSP LH LG+HVCRATGQELM++
Sbjct: 186  KKNFAALIGVCYPWIHATNEGLSFAYQLLYLLDGTAFYSPALHALGLHVCRATGQELMES 245

Query: 694  XXXXXXXXXXXXXXXRGPPWLKTLQRVLLSCMYTSLDYAQTGLIAAVFFFKMMEWWYQSA 515
                           RGPPWLKT+QRVLL+CMYTSLDYAQTGLIAAVFFFKMMEWWYQSA
Sbjct: 246  SSRVSRIRNRELERLRGPPWLKTMQRVLLNCMYTSLDYAQTGLIAAVFFFKMMEWWYQSA 305

Query: 514  EERMSAPTVYXXXXXXXXPKVAEGGIPLPSDRTICPLCSQKRVNASVVADSGFVFCYPCI 335
            EERMSAPTVY        PKVA+ G+PLP DRT+CPLC QKR N SV++ SGFVFCY CI
Sbjct: 306  EERMSAPTVYPPPPPPPLPKVAKDGLPLPPDRTLCPLCCQKRNNPSVLSASGFVFCYSCI 365

Query: 334  FRYVSQYKRCPVTLMPTTVEQIRRLFHDM 248
            F+ VSQ+KRCP+TLMP TVEQIRRLFHD+
Sbjct: 366  FKSVSQHKRCPITLMPATVEQIRRLFHDL 394


Top