BLASTX nr result

ID: Cimicifuga21_contig00023966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023966
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25672.3| unnamed protein product [Vitis vinifera]               78   7e-13
ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854...    78   9e-13
emb|CBI38507.3| unnamed protein product [Vitis vinifera]               78   9e-13
emb|CBI25918.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex ...    65   6e-09

>emb|CBI25672.3| unnamed protein product [Vitis vinifera]
          Length = 91

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 46/87 (52%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
 Frame = -3

Query: 304 EMVDSSVEQQP----VPRGGPIYLSDLVGPITKVTEFETSVVQELQSLINELNTAESCXX 137
           E+V+  +E +     VPRGGPIY+ D VGPIT+V EF TSVVQ LQ L  E++ A     
Sbjct: 2   EIVECGLEDEDSYVSVPRGGPIYVPDFVGPITRVPEFLTSVVQHLQDLEAEISQARD--- 58

Query: 136 XXXXXXXLKVFSEEELVDKALKEAFQV 56
                  LK+F+EEELVDKA KEAF+V
Sbjct: 59  EVLSVDELKIFTEEELVDKAFKEAFKV 85


>ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854109 [Vitis vinifera]
          Length = 443

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
 Frame = -3

Query: 304 EMVDSSVEQQP----VPRGGPIYLSDLVGPITKVTEFETSVVQELQSLINELNTAESCXX 137
           E+V+  +E +     VPRGGPIY+ D VGPIT+V EF TSVVQ LQ L  E++ A     
Sbjct: 2   EIVECGLEDEDSYVSVPRGGPIYVPDFVGPITRVPEFLTSVVQHLQDLEAEISQAHD--- 58

Query: 136 XXXXXXXLKVFSEEELVDKALKEAFQVEIETQSSTLVQQQH 14
                  LK+F+EEELVDKA KEAF+     Q S+ +  ++
Sbjct: 59  EVLSVDELKIFTEEELVDKAFKEAFKDSEGAQHSSQLSDEN 99


>emb|CBI38507.3| unnamed protein product [Vitis vinifera]
          Length = 103

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
 Frame = -3

Query: 304 EMVDSSVEQQP----VPRGGPIYLSDLVGPITKVTEFETSVVQELQSLINELNTAESCXX 137
           E+V+  +E +     VPRGGPIY+ D VGPIT+V EF TSVVQ LQ L  E++ A     
Sbjct: 2   EIVECGLEDEDSYVSVPRGGPIYVPDFVGPITRVPEFLTSVVQHLQDLEAEISQARD--- 58

Query: 136 XXXXXXXLKVFSEEELVDKALKEAFQVEIETQSSTLVQQQH 14
                  LK+F+EEELVDKA KEAF+     Q S+ +  ++
Sbjct: 59  EVLSVDELKIFTEEELVDKAFKEAFKDSEGAQHSSQLSDEN 99


>emb|CBI25918.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
 Frame = -3

Query: 304 EMVDSSVEQQP----VPRGGPIYLSDLVGPITKVTEFETSVVQELQSLINELNTAESCXX 137
           E+V+  +E +     VPRGGPIY+ D VGPIT+V EF TSVVQ LQ L  E++ A     
Sbjct: 2   EIVECGLEDEDSYVSVPRGGPIYVPDFVGPITRVPEFLTSVVQHLQDLEAEISQAHD--- 58

Query: 136 XXXXXXXLKVFSEEELVDKALKEAFQVEIETQSSTLVQQQH 14
                  LK+F+EEELVDKA KEAF+     Q S+ +  ++
Sbjct: 59  EVLSVDELKIFTEEELVDKAFKEAFKDSEGAQHSSQLSDEN 99


>ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex subunit 3-like [Glycine
           max]
          Length = 435

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/72 (45%), Positives = 49/72 (68%)
 Frame = -3

Query: 274 PVPRGGPIYLSDLVGPITKVTEFETSVVQELQSLINELNTAESCXXXXXXXXXLKVFSEE 95
           P+PRGGPIY+ ++VGP T+V  F+T ++ EL++L  EL  +E           LK+F+E+
Sbjct: 16  PIPRGGPIYVPNMVGPSTRVPHFQTCLLSELRNLEAEL--SEDFSHLDISVDDLKIFTED 73

Query: 94  ELVDKALKEAFQ 59
           +L+D ALKE FQ
Sbjct: 74  DLMDMALKEVFQ 85


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