BLASTX nr result

ID: Cimicifuga21_contig00023948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023948
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267...   242   7e-62
emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]   242   7e-62
ref|XP_002531176.1| nucleic acid binding protein, putative [Rici...   238   8e-61
ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|2...   231   1e-58
ref|XP_002309289.1| predicted protein [Populus trichocarpa] gi|2...   197   3e-48

>ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267595 [Vitis vinifera]
          Length = 238

 Score =  242 bits (617), Expect = 7e-62
 Identities = 131/236 (55%), Positives = 159/236 (67%), Gaps = 4/236 (1%)
 Frame = +3

Query: 3   THDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEFTG--ESPDESESCATKVFEDVKDNEN 176
           THDFMNV+SFSQLPF RPA PVKEKGIRLFG EF G  +  ++SES  T + EDVKD+EN
Sbjct: 9   THDFMNVESFSQLPFIRPA-PVKEKGIRLFGKEFGGHHDPEEQSESVETNMCEDVKDSEN 67

Query: 177 AESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQSTMAHNSIHEGHMYGLVN 356
            ES R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQS M H+ + + HMYGLVN
Sbjct: 68  GESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHSGLSDAHMYGLVN 127

Query: 357 YRLGATTTPSLSSYPXXXXXXXXXXXXXXXXXXQHQFYRHQGAFSQTPINGSPLAMWRIP 536
           YRLG+  TP + +YP                    +FY   G+FSQ PING+PLA+WRIP
Sbjct: 128 YRLGSAPTPPI-TYP---------SWGSQAISSNGRFYGSHGSFSQPPINGNPLALWRIP 177

Query: 537 -PVQSPHGYNHDRLLLPSPTSYIGGDHSKLVPVESSSSRGRHIHE-PKTNIQEHVS 698
             VQ+   ++ DR        + G D      V  S+S+ R+++E  K  +Q+HVS
Sbjct: 178 ASVQTTPTFSRDRSSHHPLPLFAGDDLKPSSHVGGSTSQSRYVYESTKPGVQDHVS 233


>emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]
          Length = 270

 Score =  242 bits (617), Expect = 7e-62
 Identities = 131/236 (55%), Positives = 159/236 (67%), Gaps = 4/236 (1%)
 Frame = +3

Query: 3   THDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEFTG--ESPDESESCATKVFEDVKDNEN 176
           THDFMNV+SFSQLPF RPA PVKEKGIRLFG EF G  +  ++SES  T + EDVKD+EN
Sbjct: 41  THDFMNVESFSQLPFIRPA-PVKEKGIRLFGKEFGGHHDPEEQSESVETNMCEDVKDSEN 99

Query: 177 AESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQSTMAHNSIHEGHMYGLVN 356
            ES R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQS M H+ + + HMYGLVN
Sbjct: 100 GESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHSGLSDAHMYGLVN 159

Query: 357 YRLGATTTPSLSSYPXXXXXXXXXXXXXXXXXXQHQFYRHQGAFSQTPINGSPLAMWRIP 536
           YRLG+  TP + +YP                    +FY   G+FSQ PING+PLA+WRIP
Sbjct: 160 YRLGSAPTPPI-TYP---------SWGSQAISSNGRFYGSHGSFSQPPINGNPLALWRIP 209

Query: 537 -PVQSPHGYNHDRLLLPSPTSYIGGDHSKLVPVESSSSRGRHIHE-PKTNIQEHVS 698
             VQ+   ++ DR        + G D      V  S+S+ R+++E  K  +Q+HVS
Sbjct: 210 ASVQTTPTFSRDRSSHHPLPLFAGDDLKPSSHVGGSTSQSRYVYESTKPGVQDHVS 265


>ref|XP_002531176.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529246|gb|EEF31219.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  238 bits (608), Expect = 8e-61
 Identities = 126/235 (53%), Positives = 157/235 (66%), Gaps = 3/235 (1%)
 Frame = +3

Query: 3   THDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEFTGESP---DESESCATKVFEDVKDNE 173
           THDFMNV+SFSQLPF RPA PVKEK IRLFGIEF G      D+S S  T   ++ K++E
Sbjct: 8   THDFMNVESFSQLPFIRPA-PVKEKSIRLFGIEFGGNDSAAGDDSASAETNE-DNTKESE 65

Query: 174 NAESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQSTMAHNSIHEGHMYGLV 353
           + ++ R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQS M HNS  + H+YG++
Sbjct: 66  SGDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNSFSDAHIYGMM 125

Query: 354 NYRLGATTTPSLSSYPXXXXXXXXXXXXXXXXXXQHQFYRHQGAFSQTPINGSPLAMWRI 533
           NYR+G+  TP++ SYP                    +FY   G++ Q PINGSPL +WRI
Sbjct: 126 NYRIGSNPTPAM-SYP-----------SWNSHANSSRFYGSHGSYPQQPINGSPLGLWRI 173

Query: 534 PPVQSPHGYNHDRLLLPSPTSYIGGDHSKLVPVESSSSRGRHIHEPKTNIQEHVS 698
           P V S    + DR + P P     G+  KL  V  SSS+GR+ +E K ++Q+HVS
Sbjct: 174 PTVHSSATLHRDRSMNPLP--LFSGEELKLSQVGGSSSQGRYGYEGKPSVQDHVS 226


>ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|222867370|gb|EEF04501.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  231 bits (589), Expect = 1e-58
 Identities = 123/236 (52%), Positives = 158/236 (66%), Gaps = 4/236 (1%)
 Frame = +3

Query: 3   THDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEFTG--ESPDESESCATKVFEDV-KDNE 173
           THDFMNV+SFSQLPF RPA P+KEKGIRLFGIEF    ESP   ES + +  ED  K+NE
Sbjct: 8   THDFMNVESFSQLPFIRPA-PIKEKGIRLFGIEFGSNKESPAADESDSAETNEDAAKENE 66

Query: 174 NAESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQSTMAHNSIHEGHMYGLV 353
           ++++ R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQS M HNS+ + H YG++
Sbjct: 67  SSDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMIHNSLSDAHYYGIL 126

Query: 354 NYRLGATTTPSLSSYPXXXXXXXXXXXXXXXXXXQHQFYRHQGAFSQTPINGSPLAMWRI 533
           NYR+ + +T +++                      +++Y  QG++SQ PINGSPL +WRI
Sbjct: 127 NYRIDSISTAAMT------------HPSWNSHTSTNRYYGGQGSYSQQPINGSPLGLWRI 174

Query: 534 PPVQSPHGYNH-DRLLLPSPTSYIGGDHSKLVPVESSSSRGRHIHEPKTNIQEHVS 698
           P V       H DR + P P+    G+  K  P   SSS GR+ +E K+++Q+ VS
Sbjct: 175 PAVHGSATLQHPDRSVHPLPS--FSGEGLKPSPAGGSSSHGRYGYESKSSVQDRVS 228


>ref|XP_002309289.1| predicted protein [Populus trichocarpa] gi|222855265|gb|EEE92812.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  197 bits (500), Expect = 3e-48
 Identities = 116/237 (48%), Positives = 143/237 (60%), Gaps = 5/237 (2%)
 Frame = +3

Query: 3   THDFMNVDSFSQLPFKRPAAPVKEKGIRLFGIEF--TGESP--DESESCATKVFEDVKDN 170
           THDFMNV+SFSQLPF RPA PVKEKGIRLFGIEF    +SP  DESES  T   + VK++
Sbjct: 8   THDFMNVESFSQLPFIRPA-PVKEKGIRLFGIEFGSNNDSPAADESESAETNE-DTVKES 65

Query: 171 ENAESVRKFECHYCCRTFPTSQALGGHQNAHKRERQHAKRAHLQSTMAHNSIHEGHMYGL 350
           E++++ R+FECHYCCR FPTSQALGGHQNAHKRERQHAKRAHLQ     +S         
Sbjct: 66  ESSDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQIDSTPSS--------- 116

Query: 351 VNYRLGATTTPSLSSYPXXXXXXXXXXXXXXXXXXQHQFYRHQGAFSQTPINGSPLAMWR 530
                 A T PS +S+                     +FY   G++SQ PINGSPL +WR
Sbjct: 117 ------AMTYPSWNSH-----------------SNTSRFYGSHGSYSQQPINGSPLGLWR 153

Query: 531 IPPVQSPHGYNHDRLLLPSPTSYIGGDHSKLVPV-ESSSSRGRHIHEPKTNIQEHVS 698
           IP V     ++H    +  P     G+  K  P    SSS+GR+ ++ K + Q+HVS
Sbjct: 154 IPAVHGGGTFHHSDRSMHHPLPLFAGEELKPSPAGTGSSSQGRYGYDSKPSAQDHVS 210


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