BLASTX nr result

ID: Cimicifuga21_contig00023928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023928
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272517.2| PREDICTED: uncharacterized protein LOC100245...   238   2e-60
emb|CBI27524.3| unnamed protein product [Vitis vinifera]              238   2e-60
ref|XP_002515019.1| protein binding protein, putative [Ricinus c...   214   2e-53
ref|XP_002315643.1| predicted protein [Populus trichocarpa] gi|2...   209   7e-52
dbj|BAC84396.2| zinc finger (C3HC4-type RING finger) protein-lik...   202   1e-49

>ref|XP_002272517.2| PREDICTED: uncharacterized protein LOC100245965 [Vitis vinifera]
          Length = 255

 Score =  238 bits (606), Expect = 2e-60
 Identities = 113/165 (68%), Positives = 133/165 (80%), Gaps = 1/165 (0%)
 Frame = +2

Query: 2   GITTISSHERRATLRDFYAVIFPYLRQLQGDLTEFEDRYKRNWCTEFFDRKG-DNEKKIS 178
           G+ T+SS ER+ATLR+FYAVI+P LRQL G   E ED  KR+ CTE   RK  ++ +K+S
Sbjct: 91  GMPTMSSQERKATLREFYAVIYPSLRQLGGQFIELEDTNKRSRCTEVLSRKRVEDRRKVS 150

Query: 179 HKDLDREDECGICMEACTKMVLPNCGHSMCIDCFRDWNLRSQSCPFCRGNLKRVSSDDLW 358
            K++DR+DECGICME CTKMVLPNCGHSMCI CF DWN+RSQSCPFCRG+LKRVSS DLW
Sbjct: 151 DKEIDRDDECGICMETCTKMVLPNCGHSMCICCFHDWNVRSQSCPFCRGSLKRVSSRDLW 210

Query: 359 VLTSDGDVVDRTTLAKENLRRFYLYIDNLPLVNADTFLFIHDYMI 493
           VLT + DVVD  TLAKE+LRRFYLYIDNLP +  DT   ++DYMI
Sbjct: 211 VLTGNIDVVDTVTLAKEDLRRFYLYIDNLPPLMHDTHSLLYDYMI 255


>emb|CBI27524.3| unnamed protein product [Vitis vinifera]
          Length = 247

 Score =  238 bits (606), Expect = 2e-60
 Identities = 113/165 (68%), Positives = 133/165 (80%), Gaps = 1/165 (0%)
 Frame = +2

Query: 2   GITTISSHERRATLRDFYAVIFPYLRQLQGDLTEFEDRYKRNWCTEFFDRKG-DNEKKIS 178
           G+ T+SS ER+ATLR+FYAVI+P LRQL G   E ED  KR+ CTE   RK  ++ +K+S
Sbjct: 83  GMPTMSSQERKATLREFYAVIYPSLRQLGGQFIELEDTNKRSRCTEVLSRKRVEDRRKVS 142

Query: 179 HKDLDREDECGICMEACTKMVLPNCGHSMCIDCFRDWNLRSQSCPFCRGNLKRVSSDDLW 358
            K++DR+DECGICME CTKMVLPNCGHSMCI CF DWN+RSQSCPFCRG+LKRVSS DLW
Sbjct: 143 DKEIDRDDECGICMETCTKMVLPNCGHSMCICCFHDWNVRSQSCPFCRGSLKRVSSRDLW 202

Query: 359 VLTSDGDVVDRTTLAKENLRRFYLYIDNLPLVNADTFLFIHDYMI 493
           VLT + DVVD  TLAKE+LRRFYLYIDNLP +  DT   ++DYMI
Sbjct: 203 VLTGNIDVVDTVTLAKEDLRRFYLYIDNLPPLMHDTHSLLYDYMI 247


>ref|XP_002515019.1| protein binding protein, putative [Ricinus communis]
           gi|223546070|gb|EEF47573.1| protein binding protein,
           putative [Ricinus communis]
          Length = 253

 Score =  214 bits (545), Expect = 2e-53
 Identities = 99/165 (60%), Positives = 127/165 (76%), Gaps = 1/165 (0%)
 Frame = +2

Query: 2   GITTISSHERRATLRDFYAVIFPYLRQLQGDLTEFEDRYKRNWCTEFFDRKG-DNEKKIS 178
           G+ T+SS ER+ATLR+FYA I+P LR L+G+  E ED  +R+  TE F RK  ++++K S
Sbjct: 89  GMPTLSSKERKATLREFYATIYPSLRLLEGEFIELEDNPRRSQWTEAFSRKRVEDKRKRS 148

Query: 179 HKDLDREDECGICMEACTKMVLPNCGHSMCIDCFRDWNLRSQSCPFCRGNLKRVSSDDLW 358
             D++R+DECGICME   KMVLPNCGHS+CI CF DWN RSQSCPFCRG+LKRV S DLW
Sbjct: 149 DYDIERDDECGICMEDSAKMVLPNCGHSLCISCFHDWNTRSQSCPFCRGSLKRVKSLDLW 208

Query: 359 VLTSDGDVVDRTTLAKENLRRFYLYIDNLPLVNADTFLFIHDYMI 493
           VL ++ D++D  T+A+ENLRRFYLYI+ LPL+  +T   + DYMI
Sbjct: 209 VLINNSDIIDTVTIARENLRRFYLYIEKLPLLMPETHAILFDYMI 253


>ref|XP_002315643.1| predicted protein [Populus trichocarpa] gi|222864683|gb|EEF01814.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  209 bits (532), Expect = 7e-52
 Identities = 92/164 (56%), Positives = 125/164 (76%)
 Frame = +2

Query: 2   GITTISSHERRATLRDFYAVIFPYLRQLQGDLTEFEDRYKRNWCTEFFDRKGDNEKKISH 181
           G+ ++SS E++A+LR+FYA+I+P LRQL+G+  E ED +KR+       ++ + ++K+S 
Sbjct: 87  GMPSLSSKEKKASLREFYAIIYPSLRQLEGEFIEVEDNHKRSSTDVLSRKRMEGQRKLSE 146

Query: 182 KDLDREDECGICMEACTKMVLPNCGHSMCIDCFRDWNLRSQSCPFCRGNLKRVSSDDLWV 361
            D +R++ECGICME   KMVLPNCGHS+CI CF DWN+RSQSCPFCRG+LKR+S  DLWV
Sbjct: 147 SDFERDEECGICMENSAKMVLPNCGHSLCISCFHDWNVRSQSCPFCRGSLKRMSCTDLWV 206

Query: 362 LTSDGDVVDRTTLAKENLRRFYLYIDNLPLVNADTFLFIHDYMI 493
           L S+ DV+D   LA EN+RRFYLY+DNLP +  +T   + DYMI
Sbjct: 207 LISNDDVIDTVALAGENIRRFYLYMDNLPFLVPETQAILFDYMI 250


>dbj|BAC84396.2| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa
           Japonica Group] gi|50509639|dbj|BAD31482.1| zinc finger
           (C3HC4-type RING finger) protein-like [Oryza sativa
           Japonica Group]
          Length = 209

 Score =  202 bits (513), Expect = 1e-49
 Identities = 94/166 (56%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
 Frame = +2

Query: 2   GITTISSHERRATLRDFYAVIFPYLRQLQGDLTEFEDRYKRNWCTEFFDRKG-DNEKKIS 178
           G +++S++ERRA+LR+FYA+I+P L+QL+G L E  D   +  C +   RK  ++ +K+ 
Sbjct: 45  GDSSVSTYERRASLREFYAIIYPILQQLEGSLIE-RDLKGKGRCKDIVSRKRLEDWRKLC 103

Query: 179 HKDLDREDECGICMEACTKMVLPNCGHSMCIDCFRDWNLRSQSCPFCRGNLKRVSSDDLW 358
           +KD++REDECGICME CTKMVLPNC H+MCI C+RDW  RS+SCPFCRG+LKR+ S DLW
Sbjct: 104 NKDVEREDECGICMETCTKMVLPNCSHAMCIKCYRDWYRRSESCPFCRGSLKRIRSRDLW 163

Query: 359 VLTSDGDVVDRTTLAKENLRRFYLYIDNLPLVNADT-FLFIHDYMI 493
           VLT+  DVVD  TL +EN+R FY YID+LPL+  D  F F +DY++
Sbjct: 164 VLTNYNDVVDPVTLERENVRHFYSYIDSLPLILPDNIFFFYYDYLL 209


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