BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023924
         (1575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   145   2e-32
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   142   2e-31
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   142   3e-31
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   141   4e-31
ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-30

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  145 bits (367), Expect = 2e-32
 Identities = 124/420 (29%), Positives = 197/420 (46%), Gaps = 16/420 (3%)
 Frame = +2

Query: 86   LPLQISTTIFSSLPIKSIALCRCVCKPWYAILSDPTFPAITPDVFLLHLDTSKDFAKARF 265
            LPL++   I   LP K +  CR V KPW A++  P F         LHL  S D +   +
Sbjct: 4    LPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVK-------LHLKHSMDTSSNLY 56

Query: 266  IYLG--------DNDKTSIGEPIMPFKVFDHHFLANSFHFYPKILGSCNGIICISQLNLL 421
            I L         D ++  +    +  K  +H  +   ++   K+LGS NG++CIS +   
Sbjct: 57   IILRTTSHVHYMDFEQNLVLNDCVTLKELNHPLMC--YNHGIKVLGSVNGLLCISNVV-- 112

Query: 422  PTQFPLGDHIYIFNPITEEHSKIPSFKVPSVAKRVKMGERIYDYASGFGFESSNNEFKMV 601
                   D I ++NP T +H  +P   +P   KR    +    Y  GFG++S  +++K+V
Sbjct: 113  -------DDIAVWNPSTRKHRVVPF--LPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLV 163

Query: 602  LSVFVAIDYECTVFDNEVQVHTLGRRTWRRKIGIVPDVLRQAFNKQSMAFVNGRLHWVTI 781
                     + + F++EV+V++L +++WRR IG +P  +   +   +  F NG LHWV  
Sbjct: 164  RIAQFGGGGKRS-FESEVKVYSLRKQSWRR-IGDMPYCVH--YPGANGVFANGALHWVVG 219

Query: 782  DESSSNKGPLFVSFDLGAEEFGFVPTPESHLLKHSHDHYNLGVLEEYLSVVDYSSGPCID 961
            +   SN   + V+ DLG E++  V  PE    K  + + +LGVL   L  +    G  +D
Sbjct: 220  ENPESNVANIVVALDLGVEDYREVLQPE---YKDKNFYIDLGVLRGCLCFLANFLGERVD 276

Query: 962  VWVMKEYNVKESWVKQFSIKQ-----DLVSRQPIVRCRVELVKLRKSGELLLLCKGNYMV 1126
            VW+MKEY VKESW K FS+ Q      L S +P+           KSG+ +L+   N  +
Sbjct: 277  VWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLA--------YSKSGDEVLIEHDNLDL 328

Query: 1127 SYNITSQKCRFLKVEGVDELSSHHHIGAYAFVGSLISLESACRM---TSDTKRELKRKRK 1297
             +    +K    ++ G+      +   A  FV SLIS+     +   T D   + K + K
Sbjct: 329  CWYDLKRKQVKNRIPGIP-----YSFEADTFVESLISVSPNRHLDGRTQDDDEDSKDRNK 383


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 389

 Score =  142 bits (359), Expect = 2e-31
 Identities = 116/405 (28%), Positives = 194/405 (47%), Gaps = 2/405 (0%)
 Frame = +2

Query: 86   LPLQISTTIFSSLPIKSIALCRCVCKPWYAILSDPTFPAITPDVFLLHLDTSKDFAKARF 265
            LPL++   I   L  K +  CRCV K W  ++  PTF         LHL+ S +      
Sbjct: 4    LPLEMIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTF-------IYLHLNHSIESPCNLS 56

Query: 266  IYLGDNDKTSIGEPIMP-FKVFDHHFLANSFHFYPKILGSCNGIICISQLNLLPTQFPLG 442
            I L  ++  S+   ++   +  DH  +   ++   KILGSCNG++CI  +          
Sbjct: 57   IILKSSELYSLSFDLLDNIQPLDHPLMC--YNHGVKILGSCNGLLCICNIV--------- 105

Query: 443  DHIYIFNPITEEHSKIPSFKVPSVAKRVKMGERIYDYASGFGFESSNNEFKMV-LSVFVA 619
            D I ++NP    H  +P   V           R+  +  GFG++ SN+++K+V ++ F  
Sbjct: 106  DDIALWNPSIRAHRVVPYLPVELKRYFGMCSCRVSVF--GFGYDLSNDDYKLVRIAQFGG 163

Query: 620  IDYECTVFDNEVQVHTLGRRTWRRKIGIVPDVLRQAFNKQSMAFVNGRLHWVTIDESSSN 799
            +D +   F++EV+V +L + +WRR   +   VL   +  ++  + NG LHW+   +  S 
Sbjct: 164  VDRKS--FESEVKVFSLRKNSWRRIADMPYCVL---YPGENGIYANGALHWLVSQDPDST 218

Query: 800  KGPLFVSFDLGAEEFGFVPTPESHLLKHSHDHYNLGVLEEYLSVVDYSSGPCIDVWVMKE 979
                 V+ DLG E++  VP PE       + +  +GVL+  LS++ Y+    +DVWVM+E
Sbjct: 219  VADTIVALDLGVEDYHVVPKPE---FVDMNCNMGVGVLQGCLSLLAYARSERVDVWVMEE 275

Query: 980  YNVKESWVKQFSIKQDLVSRQPIVRCRVELVKLRKSGELLLLCKGNYMVSYNITSQKCRF 1159
            Y VKESW K FS+ +  +    I+R    L   +   E+L+      +  Y++  ++   
Sbjct: 276  YMVKESWSKLFSVAR--LEVIGILRSLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVVN 333

Query: 1160 LKVEGVDELSSHHHIGAYAFVGSLISLESACRMTSDTKRELKRKR 1294
            + ++GV          A   VGSL+ L +A R+    K E K  +
Sbjct: 334  VWIQGVPIT-----FEAEICVGSLVPL-NANRLRRRPKHEHKETK 372


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  142 bits (357), Expect = 3e-31
 Identities = 126/411 (30%), Positives = 184/411 (44%), Gaps = 30/411 (7%)
 Frame = +2

Query: 86   LPLQISTTIFSSLPIKSIALCRCVCKPWYAILSDPTFP-------AITPDVFLLHLDTS- 241
            LP  I   I S LP+ S+   R VC+ W  +  D           A      +LH D   
Sbjct: 30   LPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNPCLILHCDYPI 89

Query: 242  KDFAKARFIYLGDNDKTSIGEPIMPFKVFDHHFLANSFHFYPKILGSCNGIICISQLNLL 421
            ++      I     DK  + +  +PF      F         +++GSCNG++C++     
Sbjct: 90   RNQISFVDISAESRDKDMVRKLTIPFWASMPEF---------EVVGSCNGLLCLADSLFK 140

Query: 422  PTQFPLGDHIYIFNPITEEHSKIP-SFKVPSVAKRVKMGERIYDYASGFGFESSNNEFKM 598
                   D +Y+ NP T +  ++P S + P             +   GFG+      +K+
Sbjct: 141  -------DAVYVHNPFTRDFKQLPKSLQYPD-----------QEVVFGFGYHPMTEVYKV 182

Query: 599  VLSVFVAIDY-------ECTVFDNEVQVHTLGRRTWRRKIGIVPDVLRQAFNKQSMAFVN 757
            V  V+    Y         T   +EVQV TLG  TWR     +  V  Q     S A VN
Sbjct: 183  VKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRS----LGKVSYQLDRWPSEALVN 238

Query: 758  GRLHWVTIDESSSNKGPLFVSFDLGAEEFGFVPTPESHLLKHSHDHYNLGVLEEYLSVVD 937
            GRLHWVT       +    VSFDL  E+F  +P P+   L  S  +Y+L VL   LS   
Sbjct: 239  GRLHWVTRPRRYVTR--FIVSFDLADEQFREIPKPDCGGL--SRCNYHLLVLGGCLSAAV 294

Query: 938  YSSGPCIDVWVMKEYNVKESWVKQFSI--------KQDLVSRQPIVRCR-----VELVKL 1078
            + S   ++VWVMKEY+VKESW+K+F+I        KQD+     I R       V L+ L
Sbjct: 295  HRSNGKLEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCL 354

Query: 1079 RKSGELLLLCKGNYMVSYNITSQKCRFLKVEGVDE-LSSHHHIGAYAFVGS 1228
             K+GE+LL  KG  +VSYN    K + L ++G+     +  H+G+ +++ S
Sbjct: 355  LKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSLSWIDS 405


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  141 bits (356), Expect = 4e-31
 Identities = 124/415 (29%), Positives = 191/415 (46%), Gaps = 36/415 (8%)
 Frame = +2

Query: 86   LPLQISTTIFSSLPIKSIALCRCVCKPWYAILSDPTFPAI--------TPDVFLLHLDTS 241
            LP +I+  I S LPI S+   +CVC+ W A+  DP    +        T    +LH D  
Sbjct: 28   LPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCVILHCD-- 85

Query: 242  KDFAKARFIYLGD-----NDKTSIGEPIMPFKVFDHHFLANSFHFYPKILGSCNGIICIS 406
              F     +Y  D      +K  +     PF      F         +++GSCNG++C+S
Sbjct: 86   --FPIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMMPEF---------EVVGSCNGLLCLS 134

Query: 407  QLNLLPTQFPLGDHIYIFNPITEEHSKIP-SFKVPSVAKRVKMGERIYDYASGFGFESSN 583
                        D +YI+NP T  + ++P S + P             +   GFGF    
Sbjct: 135  DSLF-------NDSLYIYNPFTGRYKELPKSLQYPD-----------QEVVFGFGFNPKT 176

Query: 584  NEFKMVLSVFVAIDY------ECTVFD-NEVQVHTLGRRTWRRKIGIVPDVLRQAFNKQS 742
            NE+K++  V+    +         ++  ++VQ+ TLG   WR    +   ++R+A    S
Sbjct: 177  NEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRA----S 232

Query: 743  MAFVNGRLHWVTIDESSSNK-GPLFVSFDLGAEEFGFVPTPESHLLKHSHDHYNLGVLEE 919
               VNGRLHWV+      NK     VSFDL  E+F  VP P+   L      Y+L VL  
Sbjct: 233  ETLVNGRLHWVS--RPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRCD--YHLAVLRG 288

Query: 920  YLSVVDYSSGPCIDVWVMKEYNVKESWVKQFSI--------KQDLVSRQPIVR-----CR 1060
             LSV  Y +   +++WVMKEYNVKESWVK+++I        KQ+LV    I +       
Sbjct: 289  CLSVAVYCNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRA 348

Query: 1061 VELVKLRKSGELLLLCKGNYMVSYNITSQKCRFLKVEGVDE-LSSHHHIGAYAFV 1222
            V  + + K+GE+LL  K   +VSY+    K + + ++G  +   +  H+G+  ++
Sbjct: 349  VRALCVLKNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSLNWI 403


>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  139 bits (349), Expect = 3e-30
 Identities = 134/481 (27%), Positives = 204/481 (42%), Gaps = 23/481 (4%)
 Frame = +2

Query: 86   LPLQISTTIFSSLPIKSIALCRCVCKPWYAILSDPTFPAI----TPDVFLLHLDTSKDFA 253
            LP+Q    I S LP K+I  C CVCK W  ++  P F  +     P   +L         
Sbjct: 35   LPIQNLVDILSRLPFKTIFSCMCVCKKWKDLILAPDFAKLHHTRAPASLILRSHRHGRRR 94

Query: 254  KARFIYLGDNDKTSIGEPIMPFKVF-DHHFLANSFHFYPKILGSCNGIICISQLNLLPTQ 430
            + R + L D + + I  P    K+  D  F   +F    +I+ +CNG+ICI         
Sbjct: 95   RPRSLCLLDLEASDICSPDAAVKLSPDFGFPTGNF----EIVNTCNGLICIRH------- 143

Query: 431  FPLGDHIYIFNPITEEHSKIPSFKVPSVAKRVKMGERIYDYASGFGFESSNNEFKMVLSV 610
            F   + I I NP+  ++  +P           K   + Y + S FG     +E+K++  V
Sbjct: 144  FHSPNDISILNPLVGDYITLPL---------TKKKHKSYVF-SWFGHSPKTDEYKVIQFV 193

Query: 611  FVAIDYECTVFDNEVQVHTLGRRTWRRKIG--IVPDVLRQAFNKQSMAFVNGRLHWVTID 784
                  E        ++HTLG+ TW    G  + P +  +  N    AFV G LHW+  D
Sbjct: 194  QQPSKLEA-------EIHTLGKGTWTSIHGGALSPPIDMRCHN----AFVGGCLHWIVND 242

Query: 785  ESSSNKGPLFVSFDLGAEEFGFVPTPESHLLKHSHDHYN---LGVLEEYLSVVDYSSGPC 955
             S S         + G E F  V  P  HL  +  D      LGVL   L   DY  G  
Sbjct: 243  PSKSE---FIYCLEFGRELFQPVAAPP-HLGPNDKDRTGDMMLGVLGGCLYFFDYPLGDS 298

Query: 956  IDVWVMKEYNVKESWVKQFSIKQ---DLVSRQPIVRCRVELVKLRKSGELLLLCKGNYMV 1126
             D+WVMK+Y V+ESW K+F +K    D++    + R     + L  +GE+L+  K   MV
Sbjct: 299  FDIWVMKQYGVQESWTKEFILKNPSTDIIWYWDLYR----PISLLSNGEILMSHKSKAMV 354

Query: 1127 SYNITSQKCRFLKVEGVDELSSHHHIGAYAFVGSLISLESA------CRMTSDTKRELKR 1288
            SYN   +  RFLK+ G+    ++ ++ ++     ++  E+       C  T + +  LK+
Sbjct: 355  SYNPEDRSFRFLKIYGIQNFEANPYVPSFLSPREIVKGENTDSNSFLCISTMERQGILKQ 414

Query: 1289 KRK*YS*KFIL----GSLGHGGWLQLKRGRWI*NQCPSFSGFV*LLKHLLSQVQMETWYF 1456
              K Y     +     S+G   W   K  + I  +  +F  F         QV +ETW  
Sbjct: 415  LFKTYKNPLAIVVTTESIG-PNWYSGKLIKSILERLNAFMSF-------SPQVYLETWQI 466

Query: 1457 V 1459
            +
Sbjct: 467  I 467