BLASTX nr result
ID: Cimicifuga21_contig00023910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00023910
(1010 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca... 258 2e-66
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta... 254 2e-65
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera] 242 9e-62
emb|CBI36394.3| unnamed protein product [Vitis vinifera] 240 3e-61
ref|XP_003632840.1| PREDICTED: putative disease resistance prote... 237 3e-60
>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 906
Score = 258 bits (658), Expect = 2e-66
Identities = 150/339 (44%), Positives = 207/339 (61%), Gaps = 10/339 (2%)
Frame = +3
Query: 6 NDGNIRYCKMHDLVHDFAQFLTKSECSILEKNDNGFSS-----NKVRHINAWNVES---P 161
+D +I C+MHD+V FAQFL+K++C ++E ++ K RH+ E P
Sbjct: 486 DDFSIVACRMHDIVQSFAQFLSKNQCFVIEFDEKNVLEMASLHTKARHMTLTGREKQFHP 545
Query: 162 SIYTLKDLRTLILRQS--KPALSELFRRFTCLKALDLSGSYLEKIPSKVERLLHLRYLNL 335
I+ LK+LRTL + Q K A +LF CL+ LDLS + + +PS V RL HLR+LNL
Sbjct: 546 IIFNLKNLRTLQVLQKDVKTAPPDLFHGLQCLRGLDLSHTSITGLPSAVGRLFHLRWLNL 605
Query: 336 SNTDLRELPKTICCLYNLQTLKLNFCQILLKLPEGIGRLSNLRHIELKGTDELSCFPRRF 515
S + LP TIC LYNL LKL+ C+ L +LP G+G+L NLR++ ++ T+ LS P+
Sbjct: 606 SGLNFVVLPDTICKLYNLLALKLHGCRRLHRLPRGLGKLINLRYLNIEETESLSVLPQGI 665
Query: 516 GRLSLLRTLCKFIVSGANGGCTIGELGNLNYLQGNLEIIGLRQVKNANEAKQAELQKKKN 695
GRLS LRTL KF + GC +GEL NLN+L+G+LEI GL +V+N NE +A L+ K++
Sbjct: 666 GRLSNLRTLSKFCIGENREGCNVGELKNLNHLRGHLEISGLEKVRNVNEVMEANLKNKEH 725
Query: 696 LRSLELDFEYFRRVNEGASEEDIERMEGVLEGLQPHNNLEEMKITGYPGSIFPCWMSSES 875
LRSL+L F + + E + VLE LQPH NLE + + Y GSI P WM +
Sbjct: 726 LRSLDLAFSFGGQ----------ELITNVLEALQPHPNLEALLVYDYGGSILPSWM---T 772
Query: 876 VLSSIVKLVLYKAKKCTRLPALGKLRSLESLDIGGFVSV 992
+L+ + L L + C LP+LGKL SLE L IG F +V
Sbjct: 773 LLTKMKDLKLLRCVNCKELPSLGKLPSLEKLLIGHFNNV 811
>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
gi|223542676|gb|EEF44213.1| leucine-rich
repeat-containing protein, putative [Ricinus communis]
Length = 940
Score = 254 bits (650), Expect = 2e-65
Identities = 151/348 (43%), Positives = 212/348 (60%), Gaps = 20/348 (5%)
Frame = +3
Query: 27 CKMHDLVHDFAQFLTKSECSILEKNDNGFSS-----NKVRH---INAWNVESPSIYTLKD 182
CKMH++VHDFAQFLTK+EC I++ ++ S + RH I PS+Y ++
Sbjct: 499 CKMHEIVHDFAQFLTKNECLIIDVDERHISGLDMLHTRTRHLTLIGPMEYFHPSVYNFRN 558
Query: 183 LRTLILRQSKPAL------------SELFRRFTCLKALDLSGSYLEKIPSKVERLLHLRY 326
LRTL++ Q + +LF T L+ LDLS + + ++PS++ +LLHLR+
Sbjct: 559 LRTLLVLQKEMLTVPGDLFRIRSIPGDLFNCLTSLRGLDLSHTLITRLPSEIGKLLHLRW 618
Query: 327 LNLSNTDLRELPKTICCLYNLQTLKLNFCQILLKLPEGIGRLSNLRHIELKGTDELSCFP 506
LNLS DL ELP T+ LYNLQTL L+ C+ L +LP G+G+L NLRH+ L+ TD L+ FP
Sbjct: 619 LNLSKLDLEELPNTLSNLYNLQTLNLDRCKRLQRLPGGLGKLKNLRHLNLRETDCLNIFP 678
Query: 507 RRFGRLSLLRTLCKFIVSGANGGCTIGELGNLNYLQGNLEIIGLRQVKNANEAKQAELQK 686
+ RLS LR L KF+VS GC I EL NL YL+G+LEI L +V + ++AK+A+L
Sbjct: 679 QGIERLSNLRMLTKFVVSENKEGCNIAELKNLKYLRGHLEISRLEKVVDTDKAKEADL-T 737
Query: 687 KKNLRSLELDFEYFRRVNEGASEEDIERMEGVLEGLQPHNNLEEMKITGYPGSIFPCWMS 866
K+L+SL+L F + + E ME V+E LQPH LE +++ Y GSIFP W+
Sbjct: 738 NKHLQSLDLVFSFGVK----------EAMENVIEVLQPHPELEALQVYDYGGSIFPNWI- 786
Query: 867 SESVLSSIVKLVLYKAKKCTRLPALGKLRSLESLDIGGFVSV*NIGPE 1010
++L+ + L L C +LP LGKL SLE L IG F S+ ++ E
Sbjct: 787 --TLLTKLKHLRLLSCINCLQLPPLGKLPSLEKLLIGHFNSLKSVSAE 832
>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
Length = 927
Score = 242 bits (618), Expect = 9e-62
Identities = 158/354 (44%), Positives = 207/354 (58%), Gaps = 18/354 (5%)
Frame = +3
Query: 3 DNDGNIRYCKMHDLVHDFAQFLTKSECSILEKNDNGFSS-----NKVRHINAWNVESP-- 161
D+DGNI CKMHD+VHDFAQFLT++EC I+E ++ S K+RH ES
Sbjct: 486 DDDGNIICCKMHDIVHDFAQFLTQNECFIVEVDNQKKGSMDLFFQKIRHATLVVRESTPN 545
Query: 162 --SIYTLKDLRTLILRQS------KPALSELFRRFTCLKALDLSGSYL-EKIPSKVERLL 314
S +K+L TL+ ++ AL L R TCL+ALDLS + L E++P +V +L+
Sbjct: 546 FASTCNMKNLHTLLAKEEFBISXVLEALXNLLRHLTCLRALDLSRNRLIEELPKEVGKLI 605
Query: 315 HLRYLNLSNT-DLRELPKTICCLYNLQTLKLNFCQILLKLPEGIGRLSNLRHIELKGTDE 491
HLRYLNLS LRELP+TIC LYNLQTL + C L KLP+ +G+L NLRH+E T
Sbjct: 606 HLRYLNLSLCYRLRELPETICDLYNLQTLNIEGCSSLQKLPQAMGKLINLRHLENCNTGS 665
Query: 492 LSCFPRRFGRLSLLRTLCKFIVSG-ANGGCTIGELGNLNYLQGNLEIIGLRQVKNANEAK 668
L P+ GRLS L+TL FIVS N C IG+L NLN L+G L I L +VK+A EA+
Sbjct: 666 LKGLPKGIGRLSSLQTLDVFIVSSHGNDECQIGDLRNLNNLRGGLSIQRLDEVKDAGEAE 725
Query: 669 QAELQKKKNLRSLELDFEYFRRVNEGASEEDIERMEGVLEGLQPHNNLEEMKITGYPGSI 848
+AEL+ + + + L L+F E +GV E LQPH NL+ + I Y
Sbjct: 726 KAELKNRVHFQYLTLEF------------GKKEGTKGVAEALQPHPNLKSLDIFNYGDRE 773
Query: 849 FPCWMSSESVLSSIVKLVLYKAKKCTRLPALGKLRSLESLDIGGFVSV*NIGPE 1010
+P WM S L+ + L + ++C LP LG+L LE LDI G V IG E
Sbjct: 774 WPNWMMGSS-LAQLKILEIGNCRRCPCLPLLGQLPVLEKLDIWGMDGVKYIGSE 826
>emb|CBI36394.3| unnamed protein product [Vitis vinifera]
Length = 613
Score = 240 bits (613), Expect = 3e-61
Identities = 158/350 (45%), Positives = 206/350 (58%), Gaps = 17/350 (4%)
Frame = +3
Query: 6 NDGNIRYCKMHDLVHDFAQFLTKSECSILEKNDNGFSS-----NKVRHINAWNVESP--- 161
+DGNI CKMHD+VHDFAQFLT++EC I+E ++ S K+RH ES
Sbjct: 169 DDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQQMESIDLSFKKIRHTTLVVRESTPNF 228
Query: 162 -SIYTLKDLRTLILRQSK-----PALSELFRRFTCLKALDLSGSYL-EKIPSKVERLLHL 320
S Y +K+L TL+ +++ AL L R TCLKALDLS + L E++P +V +L+HL
Sbjct: 229 TSTYNMKNLHTLLAKEAFNSRVFKALPNLLRHLTCLKALDLSSNQLIEELPREVGKLIHL 288
Query: 321 RYLNLSNT-DLRELPKTICCLYNLQTLKLNFCQILLKLPEGIGRLSNLRHIELKGTDELS 497
RYLNLS LRELP+TIC LYNLQTL + C+ L KLP+ +G+L NLRH+E D
Sbjct: 289 RYLNLSLCLSLRELPETICDLYNLQTLNIQVCESLQKLPQAMGKLINLRHLENGFVDTRE 348
Query: 498 CFPRRFGRLSLLRTLCKFIVSG-ANGGCTIGELGNLNYLQGNLEIIGLRQVKNANEAKQA 674
P+ GRLS LRTL FIVS N C IG+L NLN L+G+L I L +VK+A EA++A
Sbjct: 349 GLPKGIGRLSSLRTLDVFIVSSHGNDECQIGDLRNLNNLRGHLSIQQLDKVKDAGEAEKA 408
Query: 675 ELQKKKNLRSLELDFEYFRRVNEGASEEDIERMEGVLEGLQPHNNLEEMKITGYPGSIFP 854
EL+ K +L+ L + F E +GV E LQPH NL+ + I Y +P
Sbjct: 409 ELKNKVHLQDLTMKF-------------GTEGTKGVAEALQPHPNLKFLCICEYGDREWP 455
Query: 855 CWMSSESVLSSIVKLVLYKAKKCTRLPALGKLRSLESLDIGGFVSV*NIG 1004
WM S L+ + L L +C LP LG+L LE+L I V IG
Sbjct: 456 NWMMGSS-LAQLKTLNLDFCLRCPCLPPLGQLPVLENLWIRNMYGVKYIG 504
>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
vinifera]
Length = 903
Score = 237 bits (605), Expect = 3e-60
Identities = 159/353 (45%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Frame = +3
Query: 3 DNDGNIRYCKMHDLVHDFAQFLTKSECSILEKNDNGFSS-----NKVRHINAWNVESP-- 161
D DGNI CKMHD+VHDFAQFLT++EC I+E ++ S K+RHI ES
Sbjct: 464 DTDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQQMESIDLSFKKIRHITLVVRESTPN 523
Query: 162 --SIYTLKDLRTLILRQSKP-----ALSELFRRFTCLKALDLSGSYL-EKIPSKVERLLH 317
S Y +K+L TL+ +++ AL L R TCL+ALDLS + L E++P +V +L+H
Sbjct: 524 FVSTYNMKNLHTLLAKEAFKSSVLVALPNLLRHLTCLRALDLSSNQLIEELPKEVGKLIH 583
Query: 318 LRYLNLSNTD-LRELPKTICCLYNLQTLKLNFCQILLKLPEGIGRLSNLRHIELKGTDEL 494
LR+LNLS LRELP+TIC LYNLQTL + C L KLP+ +G+L NLRH+E +
Sbjct: 584 LRFLNLSGCFWLRELPETICDLYNLQTLNIQGCSSLRKLPQAMGKLINLRHLENSFLNNK 643
Query: 495 SCFPRRFGRLSLLRTLCKFIVSG-ANGGCTIGELGNLNYLQGNLEIIGLRQVKNANEAKQ 671
P+ GRLS L+TL FIVS N IG+L NLN L+G+L I GL +VK+A EA++
Sbjct: 644 G-LPKGIGRLSSLQTLNVFIVSSHGNDEGQIGDLRNLNNLRGDLSIQGLDEVKDAGEAEK 702
Query: 672 AELQKKKNLRSLELDFEYFRRVNEGASEEDIERMEGVLEGLQPHNNLEEMKITGYPGSIF 851
AEL+ K +L+ L L F+ EG +GV E LQPH NL+ + I Y +
Sbjct: 703 AELKNKVHLQDLTLGFDR----EEGT--------KGVAEALQPHPNLKALHIYYYGDREW 750
Query: 852 PCWMSSESVLSSIVKLVLYKAKKCTRLPALGKLRSLESLDIGGFVSV*NIGPE 1010
P WM S L+ + L L ++C LP LG+L LE L I V IG E
Sbjct: 751 PNWMMGSS-LAQLKILNLKFCERCPCLPPLGQLPVLEELGIWKMYGVKYIGSE 802