BLASTX nr result

ID: Cimicifuga21_contig00023902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023902
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26218.1| unknown [Picea sitchensis]                              59   3e-06
emb|CBI15487.3| unnamed protein product [Vitis vinifera]               57   6e-06

>gb|ABK26218.1| unknown [Picea sitchensis]
          Length = 176

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
 Frame = -1

Query: 904 CLQSTCGNSLLQFPFGKNSLCSTAYTKTHCENNTVFLTDDENPSTKFKFLQNLTKEVYSS 725
           C   TCGNS +++PFG    C   Y      N T+  T      +++  + ++TK  Y +
Sbjct: 43  CAPETCGNSTIRYPFG---TCGPLYADCSEANQTILSTQS---GSRWGVVGDITKSSYFT 96

Query: 724 TSVRLVDTSLIGCGPIPHSSVLSTSAEKWLMLG-FVRYTTDYRTGTLFNCTKQPDSDTLL 548
            ++++    +            S  +  WL+ G F   +  Y  GT+ NCT QP  D L+
Sbjct: 97  QTLQITPYDIYS---------NSEDSYDWLLKGVFFNLSDAYMVGTIVNCT-QPPGDILV 146

Query: 547 NLGKVPCLECGVTSNLCYFY 488
           N  K   L+C  ++  C+FY
Sbjct: 147 NNSKK--LDCTESNRYCFFY 164


>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
 Frame = -1

Query: 586 FNCTKQPDSDTLLNLGKVPCLECGVTSNLCYFYDGFLDQV----ANCRAYRTAIPVKV-- 425
           +NCT  P     +    + C+      +   F++  L+ +     +C++    +PV +  
Sbjct: 451 YNCTSVPVETLTI---PIDCMSNATLHSFASFHEEALEYMNFSTESCQSM-VNVPVDIDG 506

Query: 424 ---FSNLTGVVELRSVLQKGFVIEWDGRKCNLCMERDGGRCGYVNEERKSGDEFCFCKNG 254
              F NL        +L++GFV+ W    C+ C ER GGRCG+ N E       CFC++ 
Sbjct: 507 EEGFGNLLNW-NFTEILREGFVLSWTANNCSSC-ERSGGRCGFENNE-----FICFCQDR 559

Query: 253 IHKDNCTDGIIINLDAAAKDCHRGRIALIVGTAVGAMFLLFCSCYTL-YKRRHK 95
            H   C D           + HR    +I+G   G   LL  S + L Y RR+K
Sbjct: 560 PHLRTCHD--------EGLNYHR---KVIIGVCAGLGTLLISSIFFLMYLRRYK 602


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