BLASTX nr result

ID: Cimicifuga21_contig00023901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023901
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75214.1| hypothetical protein VITISV_003515 [Vitis vinifera]    96   4e-18
ref|XP_002276503.2| PREDICTED: uncharacterized protein LOC100253...    93   3e-17
emb|CBI26728.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putativ...    91   1e-16
ref|XP_002298848.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15

>emb|CAN75214.1| hypothetical protein VITISV_003515 [Vitis vinifera]
          Length = 1219

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/98 (53%), Positives = 64/98 (65%)
 Frame = -2

Query: 295 NPDVQMQPMKRSDHIRASLRSSKMFSSPTESLAASLHRGLQIIDYHQRXXXXXXXXXXXS 116
           N DV  Q +K+SD IR+SL+SSK+   PTESLAASL RGLQIIDYHQR           S
Sbjct: 643 NSDVLHQSVKQSDQIRSSLQSSKVIPGPTESLAASLQRGLQIIDYHQRNSASNKSSVAFS 702

Query: 115 FEHLALKPGQAIKQSDASVSRLIEGRTHLDGPAISQTC 2
           FEHLALKP   +++ DASV +  E +  LD P+ +  C
Sbjct: 703 FEHLALKPCPEVEKVDASVQKFPEEKPSLDAPSTTFLC 740


>ref|XP_002276503.2| PREDICTED: uncharacterized protein LOC100253712 [Vitis vinifera]
          Length = 1212

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/98 (52%), Positives = 63/98 (64%)
 Frame = -2

Query: 295 NPDVQMQPMKRSDHIRASLRSSKMFSSPTESLAASLHRGLQIIDYHQRXXXXXXXXXXXS 116
           N DV  Q +K+SD IR+SL+SSK+    TESLAASL RGLQIIDYHQR           S
Sbjct: 661 NSDVLHQSLKQSDQIRSSLQSSKVIPGTTESLAASLQRGLQIIDYHQRNSASNKSSVAFS 720

Query: 115 FEHLALKPGQAIKQSDASVSRLIEGRTHLDGPAISQTC 2
           FEHLALKP   +++ DASV +  E +  LD P+ +  C
Sbjct: 721 FEHLALKPCPEVEKVDASVQKFPEEKPSLDAPSATFLC 758


>emb|CBI26728.3| unnamed protein product [Vitis vinifera]
          Length = 1174

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/98 (52%), Positives = 63/98 (64%)
 Frame = -2

Query: 295 NPDVQMQPMKRSDHIRASLRSSKMFSSPTESLAASLHRGLQIIDYHQRXXXXXXXXXXXS 116
           N DV  Q +K+SD IR+SL+SSK+    TESLAASL RGLQIIDYHQR           S
Sbjct: 638 NSDVLHQSLKQSDQIRSSLQSSKVIPGTTESLAASLQRGLQIIDYHQRNSASNKSSVAFS 697

Query: 115 FEHLALKPGQAIKQSDASVSRLIEGRTHLDGPAISQTC 2
           FEHLALKP   +++ DASV +  E +  LD P+ +  C
Sbjct: 698 FEHLALKPCPEVEKVDASVQKFPEEKPSLDAPSATFLC 735


>ref|XP_002529040.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
           gi|223531520|gb|EEF33351.1| Chromosome-associated
           kinesin KIF4A, putative [Ricinus communis]
          Length = 1183

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/102 (49%), Positives = 66/102 (64%)
 Frame = -2

Query: 307 NSNFNPDVQMQPMKRSDHIRASLRSSKMFSSPTESLAASLHRGLQIIDYHQRXXXXXXXX 128
           ++NF  +V  Q +K+S+HIR+SLRSSK+F  PTESLAASL RGLQIID+HQ+        
Sbjct: 643 SANFKSEV-FQSLKQSEHIRSSLRSSKLFLGPTESLAASLQRGLQIIDHHQQNSASNRSS 701

Query: 127 XXXSFEHLALKPGQAIKQSDASVSRLIEGRTHLDGPAISQTC 2
              SFEHLALKP   + ++ AS+ +L E     DG +    C
Sbjct: 702 VAFSFEHLALKPCAEVDRAYASIQKLAEDAPSSDGSSAYVLC 743


>ref|XP_002298848.1| predicted protein [Populus trichocarpa] gi|222846106|gb|EEE83653.1|
           predicted protein [Populus trichocarpa]
          Length = 1178

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/88 (53%), Positives = 59/88 (67%)
 Frame = -2

Query: 307 NSNFNPDVQMQPMKRSDHIRASLRSSKMFSSPTESLAASLHRGLQIIDYHQRXXXXXXXX 128
           +SNF  DV  Q +K+S++IR+SL SSKMF  PTESLAASL RGLQIIDYHQR        
Sbjct: 641 SSNFQSDVPPQSLKQSENIRSSLCSSKMFPGPTESLAASLQRGLQIIDYHQRNSASNRSS 700

Query: 127 XXXSFEHLALKPGQAIKQSDASVSRLIE 44
              SFE L+LKP   + + + S+ +L E
Sbjct: 701 VSFSFEPLSLKPCSEVDKVNVSLQKLAE 728


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