BLASTX nr result

ID: Cimicifuga21_contig00023888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023888
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    66   1e-08
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...    66   1e-08
ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815...    65   2e-08
ref|XP_002533810.1| nuclear receptor binding set domain containi...    65   3e-08
ref|XP_004146545.1| PREDICTED: zinc finger CCCH domain-containin...    64   6e-08

>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = -3

Query: 309  GKIQGPFPLDQLRKWSNNGLFPADLRVWRISACQDVSDLLVDPLRGCIWKQS 154
            GK+QGPF + QLRKWSN G FP DLR+WRIS  Q+ S LL D L G I K +
Sbjct: 902  GKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKISKDT 953


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = -3

Query: 309  GKIQGPFPLDQLRKWSNNGLFPADLRVWRISACQDVSDLLVDPLRGCIWKQS 154
            GK+QGPF + QLRKWSN G FP DLR+WRIS  Q+ S LL D L G I K +
Sbjct: 902  GKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKISKDT 953


>ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
          Length = 1421

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 31/53 (58%), Positives = 36/53 (67%)
 Frame = -3

Query: 309  GKIQGPFPLDQLRKWSNNGLFPADLRVWRISACQDVSDLLVDPLRGCIWKQSS 151
            GK+QGPF + QL KWSN G FPADLR+WR +  QD S LL D L G   K+ S
Sbjct: 877  GKVQGPFSMVQLHKWSNTGYFPADLRIWRTTEKQDDSILLTDALAGNFSKEPS 929


>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
           putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
           nuclear receptor binding set domain containing protein
           1, nsd, putative [Ricinus communis]
          Length = 1586

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 31/46 (67%), Positives = 34/46 (73%)
 Frame = -3

Query: 309 GKIQGPFPLDQLRKWSNNGLFPADLRVWRISACQDVSDLLVDPLRG 172
           GK+QGPF + QLRKWS +GLFP DLRVWRI   QD S LL D L G
Sbjct: 847 GKVQGPFAMMQLRKWSTSGLFPPDLRVWRIDKKQDDSILLTDALVG 892


>ref|XP_004146545.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Cucumis sativus] gi|449515257|ref|XP_004164666.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           44-like [Cucumis sativus]
          Length = 1201

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = -3

Query: 309 GKIQGPFPLDQLRKWSNNGLFPADLRVWRISACQDVSDLLVDPLRGCIWKQSS 151
           GK+QGPF + QLR W+N+G F  DLRVWRI+  Q+ S LL + L GC  K SS
Sbjct: 759 GKVQGPFSMTQLRNWNNSGHFTPDLRVWRITESQNDSVLLTNALNGCYNKASS 811


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