BLASTX nr result

ID: Cimicifuga21_contig00023882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023882
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529505.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|NP_194085.4| NUC173 domain-containing protein [Arabidopsis t...    55   5e-06
emb|CAA23020.1| putative protein (fragment) [Arabidopsis thaliana]     55   5e-06
emb|CAA20475.1| putative protein [Arabidopsis thaliana] gi|72692...    55   5e-06

>ref|XP_002529505.1| conserved hypothetical protein [Ricinus communis]
           gi|223531021|gb|EEF32874.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1167

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/87 (36%), Positives = 50/87 (57%)
 Frame = +1

Query: 1   GESDKLEGDGCTSVDGGLTENAIKEEQEEAKRCMIIEFAHSLTPGAKEDLLDTIFNYIKP 180
           GE ++L   G   ++    + + +  +E+ KRC+I+E A SL  GAKEDL++ I+N++  
Sbjct: 705 GEFEQLVNHGDELIEP--EQGSFRANEEDGKRCVIMELASSLIEGAKEDLINLIYNFVIS 762

Query: 181 ALQAPDGVGQFEAYCTLSRIFEEHTSF 261
             +        EAY TLSR+ EEH  F
Sbjct: 763 VFKNTAVTSHCEAYHTLSRVLEEHAWF 789


>ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|222854916|gb|EEE92463.1|
           predicted protein [Populus trichocarpa]
          Length = 1177

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/87 (36%), Positives = 50/87 (57%)
 Frame = +1

Query: 1   GESDKLEGDGCTSVDGGLTENAIKEEQEEAKRCMIIEFAHSLTPGAKEDLLDTIFNYIKP 180
           GE  + + DG   ++      ++  ++++  RC+++E A SL  GAK D +D I+N++  
Sbjct: 703 GEFQQPKSDGDELIEE--EARSLNVQEKDVHRCVMMELASSLVVGAKTDFIDLIYNFVVF 760

Query: 181 ALQAPDGVGQFEAYCTLSRIFEEHTSF 261
             QA D  G  EAY TLSRI +EH  F
Sbjct: 761 IFQATDVTGHCEAYHTLSRILQEHAWF 787


>ref|NP_194085.4| NUC173 domain-containing protein [Arabidopsis thaliana]
           gi|332659373|gb|AEE84773.1| NUC173 domain-containing
           protein [Arabidopsis thaliana]
          Length = 1131

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
 Frame = +1

Query: 10  DKLEGDGCTSVDGGLTEN--AIKEEQE-------EAKRCMIIEFAHSLTPGAKEDLLDTI 162
           +K +  G +  +G + ++  ++ EE+E       + KR  +++ A S   GAKEDL++ I
Sbjct: 700 NKFDPAGESETEGQVNQSNDSVDEEKENCSSTKTQLKRSAVLDLASSFVEGAKEDLIELI 759

Query: 163 FNYIKPALQAPDGVGQFEAYCTLSRIFEEHTSF 261
           +N ++ + QA D    + AY TLSR+ +EH  F
Sbjct: 760 YNLVRQSFQATDEADLYGAYDTLSRVLQEHGWF 792


>emb|CAA23020.1| putative protein (fragment) [Arabidopsis thaliana]
          Length = 815

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
 Frame = +1

Query: 10  DKLEGDGCTSVDGGLTEN--AIKEEQE-------EAKRCMIIEFAHSLTPGAKEDLLDTI 162
           +K +  G +  +G + ++  ++ EE+E       + KR  +++ A S   GAKEDL++ I
Sbjct: 684 NKFDPAGESETEGQVNQSNDSVDEEKENCSSTKTQLKRSAVLDLASSFVEGAKEDLIELI 743

Query: 163 FNYIKPALQAPDGVGQFEAYCTLSRIFEEHTSF 261
           +N ++ + QA D    + AY TLSR+ +EH  F
Sbjct: 744 YNLVRQSFQATDEADLYGAYDTLSRVLQEHGWF 776


>emb|CAA20475.1| putative protein [Arabidopsis thaliana] gi|7269202|emb|CAB79309.1|
           putative protein [Arabidopsis thaliana]
          Length = 658

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
 Frame = +1

Query: 10  DKLEGDGCTSVDGGLTEN--AIKEEQE-------EAKRCMIIEFAHSLTPGAKEDLLDTI 162
           +K +  G +  +G + ++  ++ EE+E       + KR  +++ A S   GAKEDL++ I
Sbjct: 261 NKFDPAGESETEGQVNQSNDSVDEEKENCSSTKTQLKRSAVLDLASSFVEGAKEDLIELI 320

Query: 163 FNYIKPALQAPDGVGQFEAYCTLSRIFEEHTSF 261
           +N ++ + QA D    + AY TLSR+ +EH  F
Sbjct: 321 YNLVRQSFQATDEADLYGAYDTLSRVLQEHGWF 353


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