BLASTX nr result
ID: Cimicifuga21_contig00023867
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00023867
(1877 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplas... 744 0.0
emb|CBI21621.3| unnamed protein product [Vitis vinifera] 728 0.0
ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|2... 720 0.0
ref|XP_003525138.1| PREDICTED: NADH dehydrogenase C1, chloroplas... 707 0.0
ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus commun... 705 0.0
>ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like
[Vitis vinifera]
Length = 543
Score = 744 bits (1921), Expect = 0.0
Identities = 383/548 (69%), Positives = 438/548 (79%), Gaps = 5/548 (0%)
Frame = +1
Query: 31 MVFVSSSASAKLTLFGRGIPRKQ-----IPNFHTRNATNLPVFARFSDGRKRFPSFXXXX 195
M ++ SAS LTLF R R + P + A N+ + F F +
Sbjct: 1 MAQMALSASPTLTLFNRVSGRSKQWGMLFPGSSRKLAINMSILMNFQSKGFSFVASGATQ 60
Query: 196 XXXXXXXXXXXXXXXXPLPFYQWPDKQKPRICILGGGFGGLYTALRLESLVWSDDKKPQV 375
P Y WPDK+KPR+CILGGGFGGLYTALRLESLVW +DKKPQV
Sbjct: 61 WNGGVAELVEGEAASRP---YTWPDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQV 117
Query: 376 LLLDQSDRFVFKPMLYELLSGEVDAWEIAPRFLDLLANTSIKFIQDRVKMLHPSDHLGRN 555
LL+DQS+RFVFKPMLYELL+GEVDAWEIAPRF DLLANT ++F QDRVK+LHPSDHLG N
Sbjct: 118 LLVDQSERFVFKPMLYELLTGEVDAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMN 177
Query: 556 GSTRLSCGGRVHLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSTLEDARKVDNRL 735
G T SCGG VHLESGL IEYDWLVLALGAE KLD+VPGAAEFALPFSTLEDA +VDNRL
Sbjct: 178 GPTVSSCGGTVHLESGLVIEYDWLVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRL 237
Query: 736 KTLEREKFGKDQSPIRVAVVGCGYSGVELAATVSERLQSKGKVQAINVSTTILPGVPPGN 915
+TLER++FG+D PIRVAVVGCGYSGVELAATVSERLQ KG VQAINV TTI P PPGN
Sbjct: 238 RTLERKRFGRD-FPIRVAVVGCGYSGVELAATVSERLQDKGIVQAINVETTICPTAPPGN 296
Query: 916 REAALKVLSSRKVQLFLGYFVSCIKKAEKFEDSEQLTDTGRGKDIVVQQPHGRFILELQP 1095
REAALKVLSSR V+L LG+FV CI+KA E SE+ T++G D + + ILELQP
Sbjct: 297 REAALKVLSSRNVELLLGFFVRCIRKASISEVSEKQTESGTLLDAAAEHEPEKLILELQP 356
Query: 1096 AERDRSVQSQILEADLILWTVGSKPLVPEVDPRDRPYVLPVNGRGQAETDETLRVKGHPR 1275
AER +QSQILEADLILWTVGSKP +P+++P + P+ LP+N RGQAETDETLRVKGHPR
Sbjct: 357 AER--GLQSQILEADLILWTVGSKPQLPQLEPCEWPHELPLNARGQAETDETLRVKGHPR 414
Query: 1276 VFAIGDSAALRDSSGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLG 1455
+FA+GDS++LRDS G++LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLG
Sbjct: 415 IFAVGDSSSLRDSKGKLLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLG 474
Query: 1456 RNDAAITPSFIDGLTLDGPIGHTARKIAYLLRLPTDEHRVKVGLSWLAKSAVDSIASFQS 1635
RNDAAI+PSFI+GLTL+GPIGH ARK+AYL+RLPTDEHR+KVG+SWL KSA+DS+A+ QS
Sbjct: 475 RNDAAISPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVAAVQS 534
Query: 1636 TVTKVLSG 1659
+V KVLSG
Sbjct: 535 SVIKVLSG 542
>emb|CBI21621.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 728 bits (1879), Expect = 0.0
Identities = 378/548 (68%), Positives = 430/548 (78%), Gaps = 5/548 (0%)
Frame = +1
Query: 31 MVFVSSSASAKLTLFGRGIPRKQ-----IPNFHTRNATNLPVFARFSDGRKRFPSFXXXX 195
M ++ SAS LTLF R R + P + A N+ + F F +
Sbjct: 1 MAQMALSASPTLTLFNRVSGRSKQWGMLFPGSSRKLAINMSILMNFQSKGFSFVASGATQ 60
Query: 196 XXXXXXXXXXXXXXXXPLPFYQWPDKQKPRICILGGGFGGLYTALRLESLVWSDDKKPQV 375
P Y WPDK+KPR+CILGGGFGGLYTALRLESLVW +DKKPQV
Sbjct: 61 WNGGVAELVEGEAASRP---YTWPDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQV 117
Query: 376 LLLDQSDRFVFKPMLYELLSGEVDAWEIAPRFLDLLANTSIKFIQDRVKMLHPSDHLGRN 555
LL+DQS+RFVFKPMLYELL+GEVDAWEIAPRF DLLANT ++F QDRVK+LHPSDHLG N
Sbjct: 118 LLVDQSERFVFKPMLYELLTGEVDAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMN 177
Query: 556 GSTRLSCGGRVHLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSTLEDARKVDNRL 735
G T SCGG VHLESGL IEYDWLVLALGAE KLD+VPGAAEFALPFSTLEDA +VDNRL
Sbjct: 178 GPTVSSCGGTVHLESGLVIEYDWLVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRL 237
Query: 736 KTLEREKFGKDQSPIRVAVVGCGYSGVELAATVSERLQSKGKVQAINVSTTILPGVPPGN 915
+TLER++FG+D PIRVAVVGCGYSGVELAATVSERLQ KG VQAINV TTI P PPGN
Sbjct: 238 RTLERKRFGRD-FPIRVAVVGCGYSGVELAATVSERLQDKGIVQAINVETTICPTAPPGN 296
Query: 916 REAALKVLSSRKVQLFLGYFVSCIKKAEKFEDSEQLTDTGRGKDIVVQQPHGRFILELQP 1095
REAALKVLSSR V+L LG+FV CI+KA E + + ILELQP
Sbjct: 297 REAALKVLSSRNVELLLGFFVRCIRKASISEHEPE-----------------KLILELQP 339
Query: 1096 AERDRSVQSQILEADLILWTVGSKPLVPEVDPRDRPYVLPVNGRGQAETDETLRVKGHPR 1275
AER +QSQILEADLILWTVGSKP +P+++P + P+ LP+N RGQAETDETLRVKGHPR
Sbjct: 340 AER--GLQSQILEADLILWTVGSKPQLPQLEPCEWPHELPLNARGQAETDETLRVKGHPR 397
Query: 1276 VFAIGDSAALRDSSGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLG 1455
+FA+GDS++LRDS G++LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLG
Sbjct: 398 IFAVGDSSSLRDSKGKLLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLG 457
Query: 1456 RNDAAITPSFIDGLTLDGPIGHTARKIAYLLRLPTDEHRVKVGLSWLAKSAVDSIASFQS 1635
RNDAAI+PSFI+GLTL+GPIGH ARK+AYL+RLPTDEHR+KVG+SWL KSA+DS+A+ QS
Sbjct: 458 RNDAAISPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVAAVQS 517
Query: 1636 TVTKVLSG 1659
+V KVLSG
Sbjct: 518 SVIKVLSG 525
>ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|222852852|gb|EEE90399.1|
predicted protein [Populus trichocarpa]
Length = 553
Score = 720 bits (1858), Expect = 0.0
Identities = 362/474 (76%), Positives = 408/474 (86%), Gaps = 2/474 (0%)
Frame = +1
Query: 244 PLPFYQWPDKQKPRICILGGGFGGLYTALRLESLVWSDDKKPQVLLLDQSDRFVFKPMLY 423
P Y WPD +KP++CILGGGFGGLYTALRLESL+W+DDKKPQVLL+DQS+RFVFKP+LY
Sbjct: 100 PQRIYTWPDNKKPKVCILGGGFGGLYTALRLESLIWADDKKPQVLLVDQSERFVFKPLLY 159
Query: 424 ELLSGEVDAWEIAPRFLDLLANTSIKFIQDRVKMLHPSDHLGRNGSTRLSCGGRVHLESG 603
ELLSGEVDAWEIAPRF +LLANT I+F++DRVKMLHP+DHLG NGST GG V LESG
Sbjct: 160 ELLSGEVDAWEIAPRFSELLANTGIQFLRDRVKMLHPADHLGMNGSTGSCSGGTVVLESG 219
Query: 604 LCIEYDWLVLALGAEPKLDLVPGAAEFALPFSTLEDARKVDNRLKTLEREKFGKDQSPIR 783
L IEYDWLVL+LGA KLD VPGAAEFA PFSTLEDA KVDN+LK LER KFGKD S IR
Sbjct: 220 LLIEYDWLVLSLGAGAKLDTVPGAAEFAFPFSTLEDACKVDNKLKELERRKFGKD-SLIR 278
Query: 784 VAVVGCGYSGVELAATVSERLQSKGKVQAINVSTTILPGVPPGNREAALKVLSSRKVQLF 963
VAVVGCGYSGVELAATVSERLQ +G VQAINV+TTILP PPGNREAALKVLSSRKVQL
Sbjct: 279 VAVVGCGYSGVELAATVSERLQDRGLVQAINVNTTILPTAPPGNREAALKVLSSRKVQLL 338
Query: 964 LGYFVSCIKKAEKFEDSEQLTDTGRGKDIVVQQPHG--RFILELQPAERDRSVQSQILEA 1137
LGYFV CI+K E+ HG ++ILELQPAER +QSQILEA
Sbjct: 339 LGYFVRCIRKESDLEE------------------HGSEKYILELQPAER--GLQSQILEA 378
Query: 1138 DLILWTVGSKPLVPEVDPRDRPYVLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSS 1317
DL+LWTVGS+P +P+++P D+ + LP+NGRGQAETDETLRVKGHPR+FA+GDS+ALRD +
Sbjct: 379 DLVLWTVGSQPPLPQLEPYDKTHELPLNGRGQAETDETLRVKGHPRIFALGDSSALRDMN 438
Query: 1318 GRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPSFIDGL 1497
GRILPATAQVAFQQADF GWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAA++PSFI+GL
Sbjct: 439 GRILPATAQVAFQQADFTGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAALSPSFIEGL 498
Query: 1498 TLDGPIGHTARKIAYLLRLPTDEHRVKVGLSWLAKSAVDSIASFQSTVTKVLSG 1659
TL+GP+GH ARKIAYL+RLPTDEHR+KVG+SWL KSAVDS+AS QST++KVLSG
Sbjct: 499 TLEGPVGHAARKIAYLIRLPTDEHRLKVGISWLTKSAVDSVASIQSTLSKVLSG 552
>ref|XP_003525138.1| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like
[Glycine max]
Length = 544
Score = 707 bits (1825), Expect = 0.0
Identities = 349/468 (74%), Positives = 403/468 (86%)
Frame = +1
Query: 256 YQWPDKQKPRICILGGGFGGLYTALRLESLVWSDDKKPQVLLLDQSDRFVFKPMLYELLS 435
+ WPD +KPR+CILGGGFGGLYTALRLESL W DDKKPQ++L+DQS+RFVFKPMLYELLS
Sbjct: 80 FAWPDNKKPRVCILGGGFGGLYTALRLESLEWPDDKKPQIVLVDQSERFVFKPMLYELLS 139
Query: 436 GEVDAWEIAPRFLDLLANTSIKFIQDRVKMLHPSDHLGRNGSTRLSCGGRVHLESGLCIE 615
GEVD WEIAPRF DLLANTS++F +DRVK+L+PSDH G NGS SCGG VHLESGL IE
Sbjct: 140 GEVDEWEIAPRFSDLLANTSVQFFKDRVKVLNPSDHWGMNGSKASSCGGTVHLESGLLIE 199
Query: 616 YDWLVLALGAEPKLDLVPGAAEFALPFSTLEDARKVDNRLKTLEREKFGKDQSPIRVAVV 795
YDWLVLALGAE KLD+VPGA EFA+PFSTLEDARKV+++L LER+ FG D I VAVV
Sbjct: 200 YDWLVLALGAEAKLDVVPGAIEFAIPFSTLEDARKVNDKLTKLERKTFGTDFQ-ISVAVV 258
Query: 796 GCGYSGVELAATVSERLQSKGKVQAINVSTTILPGVPPGNREAALKVLSSRKVQLFLGYF 975
GCGYSGVELAAT++ERLQ++G V+AINV T I P PPGNRE ALKVLSSRKV+L LGYF
Sbjct: 259 GCGYSGVELAATLAERLQNRGIVRAINVETMICPNAPPGNREVALKVLSSRKVELLLGYF 318
Query: 976 VSCIKKAEKFEDSEQLTDTGRGKDIVVQQPHGRFILELQPAERDRSVQSQILEADLILWT 1155
V CI++ E S+ LT VV ++ILELQPAER +QS+I+EADL+LWT
Sbjct: 319 VRCIRRLSDLESSDPLTGVDENSTEVVPD-FEKYILELQPAER--GMQSKIIEADLVLWT 375
Query: 1156 VGSKPLVPEVDPRDRPYVLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSSGRILPA 1335
VG+KP +P+++P D P+V+P+N RGQAETDETLRVKGHPR+FA+GDS+ALRDS+GRILPA
Sbjct: 376 VGTKPPLPQLEPSDEPFVIPLNARGQAETDETLRVKGHPRIFALGDSSALRDSNGRILPA 435
Query: 1336 TAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPSFIDGLTLDGPI 1515
TAQVAFQQADF GWNLWAAIN RPLLPFRFQNLGEMMTLGRNDAAI+PSFIDGLTL+G I
Sbjct: 436 TAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFIDGLTLEGSI 495
Query: 1516 GHTARKIAYLLRLPTDEHRVKVGLSWLAKSAVDSIASFQSTVTKVLSG 1659
GHTARKIAYL+RLPTDEHR+KVG+SWL KSA+DS++S QST+ KVLSG
Sbjct: 496 GHTARKIAYLIRLPTDEHRLKVGISWLTKSAIDSVSSLQSTLYKVLSG 543
>ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus communis]
gi|223532582|gb|EEF34369.1| NADH dehydrogenase, putative
[Ricinus communis]
Length = 536
Score = 705 bits (1819), Expect = 0.0
Identities = 348/469 (74%), Positives = 401/469 (85%)
Frame = +1
Query: 256 YQWPDKQKPRICILGGGFGGLYTALRLESLVWSDDKKPQVLLLDQSDRFVFKPMLYELLS 435
Y WPD +KPR+CILGGGFGGLYTALRLESLVW+DDKKPQVLL+DQS FVFKPMLYELLS
Sbjct: 71 YTWPDNKKPRVCILGGGFGGLYTALRLESLVWADDKKPQVLLVDQSAHFVFKPMLYELLS 130
Query: 436 GEVDAWEIAPRFLDLLANTSIKFIQDRVKMLHPSDHLGRNGSTRLSCGGRVHLESGLCIE 615
GEVDAWEIAPRF DLLANT + F+QD+VK+L PSDHLG+NGS+ SCGG V L SGL IE
Sbjct: 131 GEVDAWEIAPRFSDLLANTGVLFLQDKVKLLQPSDHLGKNGSSGSSCGGTVLLASGLLIE 190
Query: 616 YDWLVLALGAEPKLDLVPGAAEFALPFSTLEDARKVDNRLKTLEREKFGKDQSPIRVAVV 795
YDWLVLALGAE +LD+VPGAA+ A PFSTLEDA +V+++L LER FGKD S IRVAVV
Sbjct: 191 YDWLVLALGAEARLDVVPGAAKCAFPFSTLEDACRVNHKLNALERRNFGKD-SLIRVAVV 249
Query: 796 GCGYSGVELAATVSERLQSKGKVQAINVSTTILPGVPPGNREAALKVLSSRKVQLFLGYF 975
GCGYSGVELAAT+SERL+ +G +QAIN+ T I P PPGNREAAL+VLSSRKVQL LGYF
Sbjct: 250 GCGYSGVELAATISERLKERGVIQAINIDTNICPAAPPGNREAALRVLSSRKVQLLLGYF 309
Query: 976 VSCIKKAEKFEDSEQLTDTGRGKDIVVQQPHGRFILELQPAERDRSVQSQILEADLILWT 1155
V CI+ A E S + ++I + ++ LELQPAER +QSQILEADL+LWT
Sbjct: 310 VRCIQIANDLETSAMSAEVDASENIASEHSSEKYFLELQPAER--GLQSQILEADLVLWT 367
Query: 1156 VGSKPLVPEVDPRDRPYVLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSSGRILPA 1335
VGSKPL+ +++ + LP+N RGQAETDETLRVKGHPR+FA+GDS+ALRDSSGR+LPA
Sbjct: 368 VGSKPLLSQLESDYQSRELPLNARGQAETDETLRVKGHPRIFALGDSSALRDSSGRLLPA 427
Query: 1336 TAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAITPSFIDGLTLDGPI 1515
TAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAA++PSFI+GLTL+GPI
Sbjct: 428 TAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAALSPSFIEGLTLEGPI 487
Query: 1516 GHTARKIAYLLRLPTDEHRVKVGLSWLAKSAVDSIASFQSTVTKVLSGP 1662
GH ARK+AYL+RLPTDEHR+KVG+SWL KSA+DS+AS QST+ KVLSGP
Sbjct: 488 GHAARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVASMQSTLAKVLSGP 536