BLASTX nr result

ID: Cimicifuga21_contig00023860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023860
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273462.1| PREDICTED: uncharacterized protein LOC100241...    76   3e-12
emb|CAN76497.1| hypothetical protein VITISV_001200 [Vitis vinifera]    76   3e-12
ref|XP_002317115.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002335250.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-10
ref|XP_003635575.1| PREDICTED: uncharacterized protein LOC100853...    66   3e-09

>ref|XP_002273462.1| PREDICTED: uncharacterized protein LOC100241922 isoform 1 [Vitis
           vinifera]
          Length = 84

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/77 (50%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
 Frame = -1

Query: 380 AMEAPSWADQWGEGGIGAMEEXXXXXXXXXXXXXXSLTK-------MDKAKAAAMVGALK 222
           A + PSWADQWG GGIGAME+                         + KAKAAAMVGA K
Sbjct: 2   ATDGPSWADQWGAGGIGAMEDDDEKTKKDSSSSKKKTDAKATAAAGLGKAKAAAMVGAQK 61

Query: 221 VKNGTSTGIKWIKTQCQ 171
           +K+GTS GIKW+K QCQ
Sbjct: 62  IKSGTSIGIKWVKNQCQ 78


>emb|CAN76497.1| hypothetical protein VITISV_001200 [Vitis vinifera]
          Length = 84

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/77 (50%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
 Frame = -1

Query: 380 AMEAPSWADQWGEGGIGAMEEXXXXXXXXXXXXXXSLTK-------MDKAKAAAMVGALK 222
           A + PSWADQWG GGIGAME+                         + KAKAAAMVGA K
Sbjct: 2   ATDGPSWADQWGAGGIGAMEDDDEKTKKDSSSSKKKTDAKATAAAGLGKAKAAAMVGAQK 61

Query: 221 VKNGTSTGIKWIKTQCQ 171
           +K+GTS GIKW+K QCQ
Sbjct: 62  IKSGTSXGIKWVKNQCQ 78


>ref|XP_002317115.1| predicted protein [Populus trichocarpa] gi|222860180|gb|EEE97727.1|
           predicted protein [Populus trichocarpa]
          Length = 76

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = -1

Query: 380 AMEAPSWADQWGEGGIGAMEEXXXXXXXXXXXXXXSLTK---MDKAKAAAMVGALKVKNG 210
           A EAPSWADQWG GGIG+ME+               +     ++KAKAAAM GA K+++G
Sbjct: 2   ASEAPSWADQWGAGGIGSMEDDNYTGTKQHTSNKKKVDAKGGLNKAKAAAMSGAQKLRSG 61

Query: 209 TSTGIKWIKTQCQ 171
            S   KW+K++CQ
Sbjct: 62  ASNSFKWVKSKCQ 74


>ref|XP_002335250.1| predicted protein [Populus trichocarpa] gi|222833165|gb|EEE71642.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
 Frame = -1

Query: 380 AMEAPSWADQWGEGGIGAMEEXXXXXXXXXXXXXXSLTK--MDKAKAAAMVGALKVKNGT 207
           A EAPSWADQWG GGIG+MEE              S  K  ++KAKAAAM GA K+K+G 
Sbjct: 2   ASEAPSWADQWGTGGIGSMEEDNYTTKQDTSNEKKSDGKGGLNKAKAAAMSGAQKLKSGA 61

Query: 206 STGIKWIKT 180
           S+  KW+KT
Sbjct: 62  SSSFKWVKT 70


>ref|XP_003635575.1| PREDICTED: uncharacterized protein LOC100853281, partial [Vitis
           vinifera]
          Length = 72

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/71 (49%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
 Frame = -1

Query: 380 AMEAPSWADQWGEGGIGAMEEXXXXXXXXXXXXXXSLTK-------MDKAKAAAMVGALK 222
           A + PSWADQWG GGIGAME+                         + KAKAAAMVGA K
Sbjct: 2   ATDGPSWADQWGAGGIGAMEDDDEKTKKDSSSSKKKTDAKATAAAGLGKAKAAAMVGAQK 61

Query: 221 VKNGTSTGIKW 189
           +K+GTS+GIKW
Sbjct: 62  IKSGTSSGIKW 72


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