BLASTX nr result

ID: Cimicifuga21_contig00023854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023854
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...    88   8e-16
ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trich...    87   1e-15
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...    87   2e-15
emb|CAN62986.1| hypothetical protein VITISV_033996 [Vitis vinifera]    84   9e-15
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...    84   1e-14

>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   CSCLKPVVVRHDFGNRIKEIRERLENVAKEKDQLQLVEIQSHQEPNRLSTSSFVDESKIY 181
           C CL  VV R D   +IKE+ E++ ++AKE+        +   E  RL+T+SFVDES + 
Sbjct: 23  CFCLNQVVQRRDIALKIKEVSEKVNDIAKERAMFGFELYRVTDELQRLTTTSFVDESSVI 82

Query: 182 GRDDIKKTIVRELLSESS-RDQGVPVISIVGTAGFGKTTLA 301
           GRD  KK +V +LL+ESS + + V VIS+VG  G GKTTLA
Sbjct: 83  GRDGEKKNVVSKLLAESSQKARDVDVISLVGLGGIGKTTLA 123


>ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859582|gb|EEE97129.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 746

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/101 (45%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   CSCLKPVVVRHDFGNRIKEIRERLENVAKEKDQLQLVEIQSHQEPNRLSTSSFVDESKIY 181
           CSCL  VV R D   +IKE+ E+++++AKE+        ++  E  RL+++SFVDES + 
Sbjct: 114 CSCLNQVVRRRDIALKIKEVCEKVDDIAKERATYAFDPYRATDELQRLTSTSFVDESSVI 173

Query: 182 GRDDIKKTIVRELLSESSRD-QGVPVISIVGTAGFGKTTLA 301
           GRD  K T++ +L+ ESS++ + V VIS+VG  G GKTTLA
Sbjct: 174 GRDVEKTTVISKLVGESSQEARDVDVISLVGLGGIGKTTLA 214


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/101 (45%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   CSCLKPVVVRHDFGNRIKEIRERLENVAKEKDQLQLVEIQSHQEPNRLSTSSFVDESKIY 181
           C C   VV R D   +IKE+ E+++++AKE+ +      +   E  RL+T+SFVDES + 
Sbjct: 114 CFCFNQVVRRRDIALKIKEVSEKVDDIAKERAKYGFDLYKGTDELQRLTTTSFVDESSVI 173

Query: 182 GRDDIKKTIVRELLSESSRD-QGVPVISIVGTAGFGKTTLA 301
           GRD  K+ +V +LL+ESS + + V VIS+VG  G GKTTLA
Sbjct: 174 GRDGEKRNVVSKLLAESSHEARDVDVISLVGLGGIGKTTLA 214


>emb|CAN62986.1| hypothetical protein VITISV_033996 [Vitis vinifera]
          Length = 628

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   CSCLKPVVVRHDFGNRIKEIRERLENVAKEKDQLQLVEIQSHQEPNRLSTSSFVDESKIY 181
           C C K V  R D   +IK I+++L+++ +E+ +   V  +S + P RL T+S +D S++Y
Sbjct: 42  CICFKQVASRRDIALKIKGIKQQLDDIERERIRFNFVSSRSEERPQRLITTSAIDISEVY 101

Query: 182 GRDDIKKTIVRELLSESSRDQ-GVPVISIVGTAGFGKTTLA 301
           GRD  KK I+  LL +  +++ G+ ++SIVGT G GKTTLA
Sbjct: 102 GRDMDKKIILDHLLGKKCQEKSGLYIVSIVGTGGMGKTTLA 142


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 923

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   CSCLKPVVVRHDFGNRIKEIRERLENVAKEKDQLQLVEIQSHQEPNRLSTSSFVDESKIY 181
           C C K V  R D   +IK I+++L+++ +E+ +   V  +S + P RL T+S +D S++Y
Sbjct: 113 CICFKQVASRRDIALKIKGIKQQLDDIERERIRFNFVSSRSEERPQRLITTSAIDISEVY 172

Query: 182 GRDDIKKTIVRELLSESSRDQ-GVPVISIVGTAGFGKTTLA 301
           GRD  KK I+  LL +  +++ G+ ++SIVGT G GKTTLA
Sbjct: 173 GRDMDKKIILDHLLGKMCQEKSGLYIVSIVGTGGMGKTTLA 213


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