BLASTX nr result

ID: Cimicifuga21_contig00023851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023851
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002329306.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003551791.1| PREDICTED: uncharacterized protein LOC100782...    58   9e-07
ref|XP_003530464.1| PREDICTED: uncharacterized protein LOC100784...    58   9e-07
ref|XP_002539784.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|222848272|gb|EEE85819.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
 Frame = -2

Query: 445 SANAGYHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRKSSTNSESDDI--EKAPKFCL 272
           + +AGY   NSPIPY                  L C++RKSS+NS SD    EK+ K   
Sbjct: 11  AVHAGYQDRNSPIPYLFASLALMLALIALSLIILACSYRKSSSNSSSDPEAREKSGKQGE 70

Query: 271 PPPEMEPKIVVIMAGDHMPTFLAKPVSTSQHNLQEV 164
              EMEPKIVVIMAGD  PT+LA+PVS +  + ++V
Sbjct: 71  MRAEMEPKIVVIMAGDDNPTYLAEPVSCNCQSDEQV 106


>ref|XP_002329306.1| predicted protein [Populus trichocarpa] gi|222870760|gb|EEF07891.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = -2

Query: 445 SANAGYHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRKSSTNSESDDI--EKAPKFCL 272
           + +AGY   NSPIPY                  L C++RKSS+ S +D    EK+     
Sbjct: 11  AVHAGYQDRNSPIPYLFSSIGLMFGLVAVALMILACSYRKSSSTSATDPEVQEKSANQVE 70

Query: 271 PPPEMEPKIVVIMAGDHMPTFLAKPVSTSQHNLQEV 164
              EMEPKIVVIMAGD  PT+LA PVS +  + ++V
Sbjct: 71  MKAEMEPKIVVIMAGDDRPTYLANPVSCNCQSDEQV 106


>ref|XP_003551791.1| PREDICTED: uncharacterized protein LOC100782742 [Glycine max]
          Length = 106

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
 Frame = -2

Query: 451 SHSANAGYHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRK----SSTNSESDDIEKAP 284
           S S   G+   +SPIPY                  L  ++RK    +S+NS SD+ EK P
Sbjct: 2   SESGAGGFKTLSSPIPYLFGGLAIMLALIAVALLILAWSYRKQYYTTSSNSASDE-EKPP 60

Query: 283 KFCLPPPE---MEPKIVVIMAGDHMPTFLAKPVSTSQHNLQ 170
           +  +   E    EPKIVVIMAG+  PT+LAKPV ++ HN Q
Sbjct: 61  QIKMVEKEENVSEPKIVVIMAGEGNPTYLAKPVPSTSHNEQ 101


>ref|XP_003530464.1| PREDICTED: uncharacterized protein LOC100784628 [Glycine max]
          Length = 113

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
 Frame = -2

Query: 451 SHSANAGYHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRK---SSTNSESDDIEKAPK 281
           S S   G+   +SPIPY                  L  ++RK   +S+NS SD+ EK P 
Sbjct: 2   SESGAGGFKTLSSPIPYLFGGLAIMLAVIAVALLILAWSYRKQYYTSSNSASDE-EKPPP 60

Query: 280 FCLPPPE---MEPKIVVIMAGDHMPTFLAKPVSTSQHNLQ 170
             +   E    EPKIVVIMAG+  PT+LAKPV ++ HN Q
Sbjct: 61  IKMVEKEENVSEPKIVVIMAGESNPTYLAKPVPSTSHNEQ 100


>ref|XP_002539784.1| conserved hypothetical protein [Ricinus communis]
           gi|223502421|gb|EEF22599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
 Frame = -2

Query: 445 SANAGYHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRKSSTNSESDDIEKAPKFCLPP 266
           +A AG+   +SPIPY                  L C++RKS  N ES D +   K     
Sbjct: 13  AAAAGFWHWSSPIPYLFGGLAVMLAFVTVSLIILACSYRKSLFNHESRDDDHEDKTGAKK 72

Query: 265 PEM-----EPKIVVIMAGDHMPTFLAKP 197
            E+     EPKIVVIMAGD+ PTFLAKP
Sbjct: 73  VEVMVDSDEPKIVVIMAGDNNPTFLAKP 100


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