BLASTX nr result

ID: Cimicifuga21_contig00023850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023850
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002329306.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
ref|NP_001241098.1| uncharacterized protein LOC100797343 [Glycin...    57   2e-06
ref|XP_003551791.1| PREDICTED: uncharacterized protein LOC100782...    56   3e-06
ref|XP_003530464.1| PREDICTED: uncharacterized protein LOC100784...    56   4e-06

>ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|222848272|gb|EEE85819.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
 Frame = -2

Query: 526 SSSHSANAGHHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRKSSTNS--EPDDIEKAP 353
           S++ + +AG+   NSPIPY                  L C++RKSS+NS  +P+  EK+ 
Sbjct: 7   STTPAVHAGYQDRNSPIPYLFASLALMLALIALSLIILACSYRKSSSNSSSDPEAREKSG 66

Query: 352 RLCLPPPEMEPKIVVIMAGNHMPTFLAKPVSTSQHNQQEV 233
           +      EMEPKIVVIMAG+  PT+LA+PVS +  + ++V
Sbjct: 67  KQGEMRAEMEPKIVVIMAGDDNPTYLAEPVSCNCQSDEQV 106


>ref|XP_002329306.1| predicted protein [Populus trichocarpa] gi|222870760|gb|EEF07891.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
 Frame = -2

Query: 541 RKMWPSSSHSANAGHHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRKSSTNS--EPDD 368
           R  + S++ + +AG+   NSPIPY                  L C++RKSS+ S  +P+ 
Sbjct: 2   RPAFNSTAPAVHAGYQDRNSPIPYLFSSIGLMFGLVAVALMILACSYRKSSSTSATDPEV 61

Query: 367 IEKAPRLCLPPPEMEPKIVVIMAGNHMPTFLAKPVSTSQHNQQEV 233
            EK+        EMEPKIVVIMAG+  PT+LA PVS +  + ++V
Sbjct: 62  QEKSANQVEMKAEMEPKIVVIMAGDDRPTYLANPVSCNCQSDEQV 106


>ref|NP_001241098.1| uncharacterized protein LOC100797343 [Glycine max]
           gi|255641996|gb|ACU21265.1| unknown [Glycine max]
          Length = 126

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
 Frame = -2

Query: 538 KMWPSSSHSANAGHHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRK-----SSTNSEP 374
           K  P+SS  + +G ++  SPIPY                  LVC++RK     SS++SE 
Sbjct: 5   KSVPTSSPVSGSGINIWKSPIPYLFGGLAVMLAIISMALVILVCSYRKRDSQSSSSSSEV 64

Query: 373 DDIEKAPRLCLPPPEM--EPKIVVIMAGNHMPTFLAKPVSTS 254
           D  E   +      E   EP+++VIMAGNH PT+LAKP+++S
Sbjct: 65  DQEEIKSQAMSKNLETNSEPEVLVIMAGNHNPTYLAKPITSS 106


>ref|XP_003551791.1| PREDICTED: uncharacterized protein LOC100782742 [Glycine max]
          Length = 106

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
 Frame = -2

Query: 520 SHSANAGHHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRK----SSTNSEPDDIEKAP 353
           S S   G    +SPIPY                  L  ++RK    +S+NS  D+ EK P
Sbjct: 2   SESGAGGFKTLSSPIPYLFGGLAIMLALIAVALLILAWSYRKQYYTTSSNSASDE-EKPP 60

Query: 352 RLCLPPPE---MEPKIVVIMAGNHMPTFLAKPVSTSQHNQQ 239
           ++ +   E    EPKIVVIMAG   PT+LAKPV ++ HN+Q
Sbjct: 61  QIKMVEKEENVSEPKIVVIMAGEGNPTYLAKPVPSTSHNEQ 101


>ref|XP_003530464.1| PREDICTED: uncharacterized protein LOC100784628 [Glycine max]
          Length = 113

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
 Frame = -2

Query: 520 SHSANAGHHLANSPIPYXXXXXXXXXXXXXXXXXXLVCTHRK---SSTNSEPDDIEKAPR 350
           S S   G    +SPIPY                  L  ++RK   +S+NS  D+ EK P 
Sbjct: 2   SESGAGGFKTLSSPIPYLFGGLAIMLAVIAVALLILAWSYRKQYYTSSNSASDE-EKPPP 60

Query: 349 LCLPPPE---MEPKIVVIMAGNHMPTFLAKPVSTSQHNQQ 239
           + +   E    EPKIVVIMAG   PT+LAKPV ++ HN+Q
Sbjct: 61  IKMVEKEENVSEPKIVVIMAGESNPTYLAKPVPSTSHNEQ 100


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