BLASTX nr result

ID: Cimicifuga21_contig00023847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023847
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509570.1| conserved hypothetical protein [Ricinus comm...   133   1e-29
ref|XP_002265795.1| PREDICTED: 54S ribosomal protein L37, mitoch...   130   1e-28
ref|NP_566150.1| Mitochondrial ribosomal protein L37 [Arabidopsi...   128   4e-28
ref|XP_002884262.1| hypothetical protein ARALYDRAFT_896070 [Arab...   127   1e-27
ref|XP_003620189.1| hypothetical protein MTR_6g078300 [Medicago ...   127   1e-27

>ref|XP_002509570.1| conserved hypothetical protein [Ricinus communis]
           gi|223549469|gb|EEF50957.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 130

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = -1

Query: 513 IGANTLKDGTDPKLLPDSEYPDWLWHLMDKRAPLSELKRRNIEGLPYEELKRFVKLDNRA 334
           +GAN LKDG DPK+LPDS+YPDWLWHL+DKR PLSEL+R+NIE LPYE+LKRFVKLDNRA
Sbjct: 59  VGANILKDGADPKILPDSDYPDWLWHLLDKRLPLSELRRKNIETLPYEDLKRFVKLDNRA 118

Query: 333 RIKENNSVKAKN 298
            IKENNSVKAKN
Sbjct: 119 SIKENNSVKAKN 130


>ref|XP_002265795.1| PREDICTED: 54S ribosomal protein L37, mitochondrial-like [Vitis
           vinifera]
          Length = 132

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/72 (80%), Positives = 67/72 (93%)
 Frame = -1

Query: 513 IGANTLKDGTDPKLLPDSEYPDWLWHLMDKRAPLSELKRRNIEGLPYEELKRFVKLDNRA 334
           +GAN LKDGTDPK+LPDSEYPDWLWHL+DKR  LSEL+R+++E LPYE LKRFVKLDNRA
Sbjct: 61  VGANILKDGTDPKVLPDSEYPDWLWHLLDKRPALSELRRKSVESLPYEALKRFVKLDNRA 120

Query: 333 RIKENNSVKAKN 298
           RIKENN++KAKN
Sbjct: 121 RIKENNNLKAKN 132


>ref|NP_566150.1| Mitochondrial ribosomal protein L37 [Arabidopsis thaliana]
           gi|6016731|gb|AAF01557.1|AC009325_27 unknown protein
           [Arabidopsis thaliana]
           gi|6091718|gb|AAF03430.1|AC010797_6 unknown protein
           [Arabidopsis thaliana] gi|21592342|gb|AAM64293.1|
           unknown [Arabidopsis thaliana]
           gi|28393066|gb|AAO41967.1| unknown protein [Arabidopsis
           thaliana] gi|28827392|gb|AAO50540.1| unknown protein
           [Arabidopsis thaliana] gi|332640188|gb|AEE73709.1|
           Mitochondrial ribosomal protein L37 [Arabidopsis
           thaliana]
          Length = 126

 Score =  128 bits (322), Expect = 4e-28
 Identities = 55/72 (76%), Positives = 67/72 (93%)
 Frame = -1

Query: 513 IGANTLKDGTDPKLLPDSEYPDWLWHLMDKRAPLSELKRRNIEGLPYEELKRFVKLDNRA 334
           +GANTLKDG+DPK+LPDS+YPDWLWHL+DKR  LSEL+R+N+E LPY++LKRFVKLD R 
Sbjct: 55  VGANTLKDGSDPKILPDSDYPDWLWHLLDKRPALSELRRKNVETLPYDDLKRFVKLDTRG 114

Query: 333 RIKENNSVKAKN 298
           +IKENNS+KAKN
Sbjct: 115 KIKENNSIKAKN 126


>ref|XP_002884262.1| hypothetical protein ARALYDRAFT_896070 [Arabidopsis lyrata subsp.
           lyrata] gi|297330102|gb|EFH60521.1| hypothetical protein
           ARALYDRAFT_896070 [Arabidopsis lyrata subsp. lyrata]
          Length = 125

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/72 (76%), Positives = 67/72 (93%)
 Frame = -1

Query: 513 IGANTLKDGTDPKLLPDSEYPDWLWHLMDKRAPLSELKRRNIEGLPYEELKRFVKLDNRA 334
           +GANTLKDG+DPK+LPDS+YPDWLW L+DKR  LSEL+R+N+E LPY++LKRFVKLD RA
Sbjct: 54  VGANTLKDGSDPKILPDSDYPDWLWRLLDKRPALSELRRKNVETLPYDDLKRFVKLDTRA 113

Query: 333 RIKENNSVKAKN 298
           +IKENNS+KAKN
Sbjct: 114 KIKENNSIKAKN 125


>ref|XP_003620189.1| hypothetical protein MTR_6g078300 [Medicago truncatula]
           gi|217069986|gb|ACJ83353.1| unknown [Medicago
           truncatula] gi|355495204|gb|AES76407.1| hypothetical
           protein MTR_6g078300 [Medicago truncatula]
           gi|388518995|gb|AFK47559.1| unknown [Medicago
           truncatula]
          Length = 131

 Score =  127 bits (318), Expect = 1e-27
 Identities = 56/72 (77%), Positives = 66/72 (91%)
 Frame = -1

Query: 513 IGANTLKDGTDPKLLPDSEYPDWLWHLMDKRAPLSELKRRNIEGLPYEELKRFVKLDNRA 334
           +G N LK+GTDPK+LPDSEYPDWLWHL+DKR  LSEL+R+ I+ LPYE+LKR+VKLDNRA
Sbjct: 60  VGGNILKEGTDPKILPDSEYPDWLWHLLDKRPALSELRRKEIDTLPYEDLKRYVKLDNRA 119

Query: 333 RIKENNSVKAKN 298
           RIKENNS+KAKN
Sbjct: 120 RIKENNSLKAKN 131


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