BLASTX nr result
ID: Cimicifuga21_contig00023840
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00023840 (703 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524078.1| ring finger protein, putative [Ricinus commu... 181 2e-43 ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2... 174 2e-41 ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A... 171 1e-40 ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|2... 171 2e-40 ref|XP_003520719.1| PREDICTED: RING-H2 finger protein ATL70-like... 167 2e-39 >ref|XP_002524078.1| ring finger protein, putative [Ricinus communis] gi|223536646|gb|EEF38288.1| ring finger protein, putative [Ricinus communis] Length = 172 Score = 181 bits (458), Expect = 2e-43 Identities = 95/171 (55%), Positives = 119/171 (69%), Gaps = 11/171 (6%) Frame = -2 Query: 639 MNNT---GGEL-TERINGFGYLIGISVGIIALVLTISLGSYFCTRS-----LASQTQLQE 487 MNNT GG L + I GFGY IG+S+GI+ L+ TI+L SYFCTR+ + QT+ + Sbjct: 1 MNNTSSGGGFLGSNDIGGFGYGIGVSIGILLLITTITLASYFCTRNHQQQQQSMQTRRRN 60 Query: 486 RSA-PPQNTTPSIPAEIGLDETTLQSYPTLLYSDAKSDNKNITS-CCTICLSDYKNDDML 313 RS PP + I E+G+DE TL++YP LLYS AK N + T+ CC+ICL+DYK+ DML Sbjct: 61 RSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYSQAKLHNTDTTATCCSICLADYKSTDML 120 Query: 312 RVLPDCGHPFHLTCVDPWLRMHPTCPVCRNXXXXXXXXXXLAEVVPLAHQQ 160 R+LPDCGH FHL CVDPWLR+HPTCPVCRN LAEVVPLA ++ Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRNSPLPTPLSTPLAEVVPLASRR 171 >ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1| predicted protein [Populus trichocarpa] Length = 154 Score = 174 bits (440), Expect = 2e-41 Identities = 88/151 (58%), Positives = 104/151 (68%), Gaps = 2/151 (1%) Frame = -2 Query: 615 TERINGFGYLIGISVGIIALVLTISLGSYFCTRSLASQTQLQER-SAPPQNTTPSIPAEI 439 + I GFGY IG+S+GI+ L+ TI+L SYFC R+ + Q R SA Q S EI Sbjct: 4 SNNIGGFGYGIGVSIGILLLITTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEI 63 Query: 438 GLDETTLQSYPTLLYSDAKSDNKNITS-CCTICLSDYKNDDMLRVLPDCGHPFHLTCVDP 262 GLDE TL+SYPTLLYS+AK + TS CC+ICL+DYK+ D LR+LPDCGH FHL CVDP Sbjct: 64 GLDEATLKSYPTLLYSEAKLHKTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDP 123 Query: 261 WLRMHPTCPVCRNXXXXXXXXXXLAEVVPLA 169 WLR+HPTCPVCR LAEVVPLA Sbjct: 124 WLRLHPTCPVCRTSPLPTPLATPLAEVVPLA 154 >ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis sativus] Length = 172 Score = 171 bits (433), Expect = 1e-40 Identities = 90/173 (52%), Positives = 114/173 (65%), Gaps = 13/173 (7%) Frame = -2 Query: 639 MNN----TGGELTE-RINGFGYLIGISVGIIALVLTISLGSYFCTRSLASQTQLQERSAP 475 MNN TGG L+ I GFGY IG+S+G++ L+ TI L SY+CTR+ S + +Q P Sbjct: 1 MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQR--TP 58 Query: 474 PQNTTP-------SIPAEIGLDETTLQSYPTLLYSDAK-SDNKNITSCCTICLSDYKNDD 319 P + P S+ +IGLD+ T+ SYP LLYS+AK N + SCC+ICL+DYKN D Sbjct: 59 PNRSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSD 118 Query: 318 MLRVLPDCGHPFHLTCVDPWLRMHPTCPVCRNXXXXXXXXXXLAEVVPLAHQQ 160 +LR+LPDCGH FHL CVDPWLR+HPTCPVCR LAE VPLA ++ Sbjct: 119 VLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRR 171 >ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|222854305|gb|EEE91852.1| predicted protein [Populus trichocarpa] Length = 146 Score = 171 bits (432), Expect = 2e-40 Identities = 86/146 (58%), Positives = 101/146 (69%), Gaps = 2/146 (1%) Frame = -2 Query: 600 GFGYLIGISVGIIALVLTISLGSYFCTRSLASQTQLQERS-APPQNTTPSIPAEIGLDET 424 GFGY IGIS+GI+ L+ TI+L SYFCTR+ + Q R+ A Q + +IGLDE Sbjct: 1 GFGYGIGISIGILLLITTITLTSYFCTRNQLASVPTQARNVADQQLNLQNFVVDIGLDEA 60 Query: 423 TLQSYPTLLYSDAKSDNKNITS-CCTICLSDYKNDDMLRVLPDCGHPFHLTCVDPWLRMH 247 TL SYPTLLYS+AK T+ CC+ICL+DYKN D LR+LPDCGH FHL CVDPWLR+H Sbjct: 61 TLNSYPTLLYSEAKLHKTGSTATCCSICLADYKNTDKLRLLPDCGHLFHLRCVDPWLRLH 120 Query: 246 PTCPVCRNXXXXXXXXXXLAEVVPLA 169 PTCPVCR LAEVVPLA Sbjct: 121 PTCPVCRTSPLPSPLATPLAEVVPLA 146 >ref|XP_003520719.1| PREDICTED: RING-H2 finger protein ATL70-like [Glycine max] Length = 171 Score = 167 bits (423), Expect = 2e-39 Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 4/164 (2%) Frame = -2 Query: 639 MNNTGGELTERINGFGYLIGISVGIIALVLTISLGSYFCTRS---LASQTQLQERSAPPQ 469 +N+ G + I+G+ Y IGIS+GI+ L++TI+L SYFCTRS A T+ + R+ Sbjct: 7 VNSPGFLGSSNISGYSYGIGISIGILLLIITITLTSYFCTRSQVSFAPATRNRRRTPNVL 66 Query: 468 NTTPSIPAEIGLDETTLQSYPTLLYSDAKSDNKNITS-CCTICLSDYKNDDMLRVLPDCG 292 SI ++ LDE T+ SYPTLLYS+AK + T+ CC+ICL+DYK DMLR+LPDCG Sbjct: 67 EPQHSI-VDVSLDEATILSYPTLLYSEAKLKKSDSTATCCSICLADYKGTDMLRMLPDCG 125 Query: 291 HPFHLTCVDPWLRMHPTCPVCRNXXXXXXXXXXLAEVVPLAHQQ 160 H FHL C+DPWLR+HPTCPVCR LAEVVPLA +Q Sbjct: 126 HQFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLASRQ 169