BLASTX nr result

ID: Cimicifuga21_contig00023820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023820
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523245.1| AP-2 complex subunit beta-1, putative [Ricin...   359   3e-97
ref|XP_003540368.1| PREDICTED: beta-adaptin-like protein C-like ...   358   7e-97
ref|XP_003540367.1| PREDICTED: beta-adaptin-like protein C-like ...   358   7e-97
ref|XP_003607308.1| AP-2 complex subunit beta [Medicago truncatu...   356   2e-96
emb|CBI34366.3| unnamed protein product [Vitis vinifera]              356   2e-96

>ref|XP_002523245.1| AP-2 complex subunit beta-1, putative [Ricinus communis]
           gi|223537541|gb|EEF39166.1| AP-2 complex subunit beta-1,
           putative [Ricinus communis]
          Length = 903

 Score =  359 bits (921), Expect = 3e-97
 Identities = 185/221 (83%), Positives = 190/221 (85%)
 Frame = +3

Query: 3   GCIRVDKITEYLCDPLQRCLKDNDPYVRKTASICVAKLYAINAELVEDRGFLDSLKDLIS 182
           GCIRVDKITEYLCDPLQRCLKD+DPYVRKTA+ICVAKL+ INAELVEDRGFL+SLKDLIS
Sbjct: 113 GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLESLKDLIS 172

Query: 183 DNNPMXXXXXXXXXXEIQEISSRPIFEIXXXXXXXXXXXXXXXXEWGQVFILDALSRYKA 362
           DNNPM          EIQE SSRPIFEI                EWGQVFILDALSRYKA
Sbjct: 173 DNNPMVVANAVAALAEIQENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKA 232

Query: 363 SDAREAENIVERVTSRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 542
           +DAREAENIVERVT RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL
Sbjct: 233 ADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 292

Query: 543 SVEAEIQYVVLRNINLIVQRRPTILAHEIKVFFCKYNDPIY 665
           S EAEIQYV LRNINLIVQRRPTILAHEIKVFFCKYNDPIY
Sbjct: 293 SAEAEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIY 333


>ref|XP_003540368.1| PREDICTED: beta-adaptin-like protein C-like isoform 2 [Glycine max]
          Length = 915

 Score =  358 bits (918), Expect = 7e-97
 Identities = 184/221 (83%), Positives = 188/221 (85%)
 Frame = +3

Query: 3   GCIRVDKITEYLCDPLQRCLKDNDPYVRKTASICVAKLYAINAELVEDRGFLDSLKDLIS 182
           GCIRVDKITEYLCDPLQRCLKD+DPYVRKTA+ICVAKLY INAELVEDRGFLDSLKDLIS
Sbjct: 130 GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLDSLKDLIS 189

Query: 183 DNNPMXXXXXXXXXXEIQEISSRPIFEIXXXXXXXXXXXXXXXXEWGQVFILDALSRYKA 362
           DNNPM          EIQE SSRPIFE+                EWGQVFILDALSRYKA
Sbjct: 190 DNNPMVVANAVAALAEIQENSSRPIFELTSSTLSKLLTALNECTEWGQVFILDALSRYKA 249

Query: 363 SDAREAENIVERVTSRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 542
           +DAREAENIVERVT RLQHANCAVVLSAVKMILQQMELITSTDV RNLCKKMAPPLVTLL
Sbjct: 250 ADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVARNLCKKMAPPLVTLL 309

Query: 543 SVEAEIQYVVLRNINLIVQRRPTILAHEIKVFFCKYNDPIY 665
           S E EIQYV LRNINLIVQRRPTILAHEIKVFFCKYNDPIY
Sbjct: 310 SAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIY 350


>ref|XP_003540367.1| PREDICTED: beta-adaptin-like protein C-like isoform 1 [Glycine max]
          Length = 898

 Score =  358 bits (918), Expect = 7e-97
 Identities = 184/221 (83%), Positives = 188/221 (85%)
 Frame = +3

Query: 3   GCIRVDKITEYLCDPLQRCLKDNDPYVRKTASICVAKLYAINAELVEDRGFLDSLKDLIS 182
           GCIRVDKITEYLCDPLQRCLKD+DPYVRKTA+ICVAKLY INAELVEDRGFLDSLKDLIS
Sbjct: 113 GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLDSLKDLIS 172

Query: 183 DNNPMXXXXXXXXXXEIQEISSRPIFEIXXXXXXXXXXXXXXXXEWGQVFILDALSRYKA 362
           DNNPM          EIQE SSRPIFE+                EWGQVFILDALSRYKA
Sbjct: 173 DNNPMVVANAVAALAEIQENSSRPIFELTSSTLSKLLTALNECTEWGQVFILDALSRYKA 232

Query: 363 SDAREAENIVERVTSRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 542
           +DAREAENIVERVT RLQHANCAVVLSAVKMILQQMELITSTDV RNLCKKMAPPLVTLL
Sbjct: 233 ADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVARNLCKKMAPPLVTLL 292

Query: 543 SVEAEIQYVVLRNINLIVQRRPTILAHEIKVFFCKYNDPIY 665
           S E EIQYV LRNINLIVQRRPTILAHEIKVFFCKYNDPIY
Sbjct: 293 SAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIY 333


>ref|XP_003607308.1| AP-2 complex subunit beta [Medicago truncatula]
           gi|355508363|gb|AES89505.1| AP-2 complex subunit beta
           [Medicago truncatula]
          Length = 896

 Score =  356 bits (914), Expect = 2e-96
 Identities = 183/221 (82%), Positives = 189/221 (85%)
 Frame = +3

Query: 3   GCIRVDKITEYLCDPLQRCLKDNDPYVRKTASICVAKLYAINAELVEDRGFLDSLKDLIS 182
           GCIRVDKITEYLCDPLQRCLKD+DPYVRKTA+ICVAKLY INAELVEDRGFL+SLKDLIS
Sbjct: 113 GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLIS 172

Query: 183 DNNPMXXXXXXXXXXEIQEISSRPIFEIXXXXXXXXXXXXXXXXEWGQVFILDALSRYKA 362
           DNNPM          EIQ+ S+RPIFEI                EWGQVFILDALSRYKA
Sbjct: 173 DNNPMVVANAVAALAEIQDNSTRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRYKA 232

Query: 363 SDAREAENIVERVTSRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 542
           +DAREAENIVERVT RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL
Sbjct: 233 ADAREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 292

Query: 543 SVEAEIQYVVLRNINLIVQRRPTILAHEIKVFFCKYNDPIY 665
           S E EIQYV LRNINLIVQRRPTILAHEIKVFFCKYNDPIY
Sbjct: 293 SAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIY 333


>emb|CBI34366.3| unnamed protein product [Vitis vinifera]
          Length = 920

 Score =  356 bits (914), Expect = 2e-96
 Identities = 183/221 (82%), Positives = 189/221 (85%)
 Frame = +3

Query: 3   GCIRVDKITEYLCDPLQRCLKDNDPYVRKTASICVAKLYAINAELVEDRGFLDSLKDLIS 182
           GCIRVDKITEYLCDPLQRCLKD+DPYVRKTASICVAKLY INAELVEDRGFL+SLKDLIS
Sbjct: 113 GCIRVDKITEYLCDPLQRCLKDDDPYVRKTASICVAKLYDINAELVEDRGFLESLKDLIS 172

Query: 183 DNNPMXXXXXXXXXXEIQEISSRPIFEIXXXXXXXXXXXXXXXXEWGQVFILDALSRYKA 362
           DNNPM          EIQE SSRPIFE+                EWGQVFILDALS+YKA
Sbjct: 173 DNNPMVVANAVAALSEIQENSSRPIFEVTSHTLSKLLTALNECTEWGQVFILDALSKYKA 232

Query: 363 SDAREAENIVERVTSRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 542
           +DAREAE+IVERVT RLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL
Sbjct: 233 ADAREAESIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLL 292

Query: 543 SVEAEIQYVVLRNINLIVQRRPTILAHEIKVFFCKYNDPIY 665
           S E EIQYV LRNINLIVQRRPTILAHEIKVFFCKYNDPIY
Sbjct: 293 SAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIY 333


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