BLASTX nr result

ID: Cimicifuga21_contig00023819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023819
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37009.3| unnamed protein product [Vitis vinifera]              201   1e-49
emb|CAN71281.1| hypothetical protein VITISV_027091 [Vitis vinifera]   200   2e-49
ref|XP_002272765.1| PREDICTED: tRNA guanosine-2'-O-methyltransfe...   199   5e-49
ref|XP_002515211.1| conserved hypothetical protein [Ricinus comm...   183   3e-44
dbj|BAJ88805.1| predicted protein [Hordeum vulgare subsp. vulgare]    180   2e-43

>emb|CBI37009.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score =  201 bits (510), Expect = 1e-49
 Identities = 94/143 (65%), Positives = 115/143 (80%), Gaps = 7/143 (4%)
 Frame = -2

Query: 623 NHLRGLAIATCCHHLCQWKHYINKSYLSDMGITKDDFHAMTRFTSWAIDADHSTDV---- 456
           ++LRGLAIATCCHHLCQWKHYINK YL ++GITKDDFHA+T FTSWA+DADH +D+    
Sbjct: 305 HYLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHAITWFTSWAVDADHGSDLSDVA 364

Query: 455 ---VEQSSIEVKECSEDVRGGAEGILREIPTVERAVLGFMCKDIIDTGRLVWIKKHGLEA 285
              +   SIE KEC EDV G AE I++ +  +ERAV+GFMCK+IID GRL+W+K+HGLE 
Sbjct: 365 GCRLHLQSIEKKECVEDVGGVAE-IVQNMKAMERAVVGFMCKEIIDMGRLMWVKEHGLET 423

Query: 284 RFVKYVPSNISPENHLLVAKYCN 216
           + VKYVP  ISPENHLL+AK+ N
Sbjct: 424 QLVKYVPPTISPENHLLIAKHAN 446


>emb|CAN71281.1| hypothetical protein VITISV_027091 [Vitis vinifera]
          Length = 440

 Score =  200 bits (509), Expect = 2e-49
 Identities = 94/142 (66%), Positives = 114/142 (80%), Gaps = 7/142 (4%)
 Frame = -2

Query: 620 HLRGLAIATCCHHLCQWKHYINKSYLSDMGITKDDFHAMTRFTSWAIDADHSTDV----- 456
           +LRGLAIATCCHHLCQWKHYINK YL ++GITKDDFHA+T FTSWA+DADH +D+     
Sbjct: 298 YLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHAITWFTSWAVDADHGSDLSDVAG 357

Query: 455 --VEQSSIEVKECSEDVRGGAEGILREIPTVERAVLGFMCKDIIDTGRLVWIKKHGLEAR 282
             +   SIE KEC EDV G AE I++ +  +ERAV+GFMCK+IID GRL+W+K+HGLE +
Sbjct: 358 CRLHLQSIEKKECVEDVGGVAE-IVQNMKAMERAVVGFMCKEIIDMGRLMWVKEHGLETQ 416

Query: 281 FVKYVPSNISPENHLLVAKYCN 216
            VKYVP  ISPENHLL+AK+ N
Sbjct: 417 LVKYVPPTISPENHLLIAKHAN 438


>ref|XP_002272765.1| PREDICTED: tRNA guanosine-2'-O-methyltransferase TRM13 homolog
           [Vitis vinifera]
          Length = 465

 Score =  199 bits (505), Expect = 5e-49
 Identities = 92/146 (63%), Positives = 116/146 (79%), Gaps = 10/146 (6%)
 Frame = -2

Query: 623 NHLRGLAIATCCHHLCQWKHYINKSYLSDMGITKDDFHAMTRFTSWAIDADHSTDVVEQS 444
           ++LRGLAIATCCHHLCQWKHYINK YL ++GITKDDFHA+T FTSWA+DADH +D+ + +
Sbjct: 319 HYLRGLAIATCCHHLCQWKHYINKKYLMNLGITKDDFHAITWFTSWAVDADHGSDLSDVA 378

Query: 443 SIEV----------KECSEDVRGGAEGILREIPTVERAVLGFMCKDIIDTGRLVWIKKHG 294
            I++          KEC EDV G AE I++ +  +ERAV+GFMCK+IID GRL+W+K+HG
Sbjct: 379 GIDILILSCCHSEKKECVEDVGGVAE-IVQNMKAMERAVVGFMCKEIIDMGRLMWVKEHG 437

Query: 293 LEARFVKYVPSNISPENHLLVAKYCN 216
           LE + VKYVP  ISPENHLL+AK+ N
Sbjct: 438 LETQLVKYVPPTISPENHLLIAKHAN 463


>ref|XP_002515211.1| conserved hypothetical protein [Ricinus communis]
           gi|223545691|gb|EEF47195.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 438

 Score =  183 bits (464), Expect = 3e-44
 Identities = 82/144 (56%), Positives = 112/144 (77%), Gaps = 5/144 (3%)
 Frame = -2

Query: 632 ANDNHLRGLAIATCCHHLCQWKHYINKSYLSDMGITKDDFHAMTRFTSWAIDADHSTDV- 456
           ++++ LRGLAIATCCHHLCQWKHYINK+ ++D+GITK++FHA+T FTSWA+DADH +D+ 
Sbjct: 294 SDNDFLRGLAIATCCHHLCQWKHYINKNLIADLGITKEEFHAITWFTSWAVDADHGSDLS 353

Query: 455 ----VEQSSIEVKECSEDVRGGAEGILREIPTVERAVLGFMCKDIIDTGRLVWIKKHGLE 288
                   S+E ++C  D   G E  +R +  V+RA+LGFMCK IID GR++W K+ GL+
Sbjct: 354 IDGRFHLQSMEEEQCGGDA-DGVEDAVRNMKAVQRAILGFMCKQIIDMGRMIWAKECGLD 412

Query: 287 ARFVKYVPSNISPENHLLVAKYCN 216
           A+ VKYVPS +SPENHLL+A++ N
Sbjct: 413 AKLVKYVPSVVSPENHLLIARHAN 436


>dbj|BAJ88805.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 459

 Score =  180 bits (457), Expect = 2e-43
 Identities = 85/144 (59%), Positives = 108/144 (75%), Gaps = 11/144 (7%)
 Frame = -2

Query: 623 NHLRGLAIATCCHHLCQWKHYINKSYLSDMGITKDDFHAMTRFTSWAIDADHSTDVVEQS 444
           +HLRGLA+ATCCHHLCQWKHY NKS+LS +GI +++FHAMT F+SWA+D DHS+    Q 
Sbjct: 317 HHLRGLALATCCHHLCQWKHYANKSFLSGLGIAEEEFHAMTWFSSWAVDGDHSS----QD 372

Query: 443 SIEVKECSEDVRG-----------GAEGILREIPTVERAVLGFMCKDIIDTGRLVWIKKH 297
           S+E ++ S + R            G E I+R IP VER+ LGFMCKDIIDTGRL+W++  
Sbjct: 373 SLEAEDLSSEGRNRETEKPDPEIIGVERIIRSIPGVERSALGFMCKDIIDTGRLLWLRSK 432

Query: 296 GLEARFVKYVPSNISPENHLLVAK 225
            L+A  V+YVPS+ISPENHLL+AK
Sbjct: 433 CLDADLVRYVPSDISPENHLLIAK 456


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