BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023805
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]   123   1e-26
ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263...   123   2e-26
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,...   117   7e-25
ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat...   114   8e-24
ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24

>emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]
          Length = 322

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/99 (65%), Positives = 74/99 (74%)
 Frame = -2

Query: 298 SPSSFTVKCKKSEQEDVELSVSCAYNVLGVDNNCSFTELKAAFRARVKQFHPDVRKDAGD 119
           S S FTV C+    E+ +LS S AY VLGVD +CS  ELKAAFRA+VKQFHPDV K+ GD
Sbjct: 42  STSRFTVNCRDRTGEEPKLSDSSAYAVLGVDPSCSAAELKAAFRAKVKQFHPDVNKEGGD 101

Query: 118 SDTMIRRVIQAYEMLSKNHQLFKTSERECLDPFDEPECE 2
           SD MIR VIQAYE+LS   +  +  ERECLDPFDEPECE
Sbjct: 102 SDKMIRLVIQAYELLSCCSR-SEIIERECLDPFDEPECE 139


>ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263014 [Vitis vinifera]
           gi|296088328|emb|CBI36773.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/99 (65%), Positives = 74/99 (74%)
 Frame = -2

Query: 298 SPSSFTVKCKKSEQEDVELSVSCAYNVLGVDNNCSFTELKAAFRARVKQFHPDVRKDAGD 119
           S S FTV C+    E+ +LS S AY VLGVD +CS  ELKAAFRA+VKQFHPDV K+ GD
Sbjct: 43  STSRFTVNCRDRTGEEPKLSDSSAYAVLGVDPSCSAPELKAAFRAKVKQFHPDVNKEGGD 102

Query: 118 SDTMIRRVIQAYEMLSKNHQLFKTSERECLDPFDEPECE 2
           SD MIR VIQAYE+LS   +  +  ERECLDPFDEPECE
Sbjct: 103 SDKMIRLVIQAYELLSCCSR-SEIIERECLDPFDEPECE 140


>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 736

 Score =  117 bits (294), Expect = 7e-25
 Identities = 66/108 (61%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 NPIYFPSPSS--FTVKCKKSEQEDVELSVS-CAYNVLGVDNNCSFTELKAAFRARVKQFH 146
           NP+ FPS S+  FTV C +   +D  LS S  A+ VLGVD  CS  ELKAAFRA+VKQFH
Sbjct: 505 NPLRFPSHSNSKFTVNCSERIGDDTPLSSSSAAHMVLGVDPGCSAAELKAAFRAKVKQFH 564

Query: 145 PDVRKDAGDSDTMIRRVIQAYEMLSKNHQLFKTSERECLDPFDEPECE 2
           PDV +D    DTMIRRVIQAYE+LS N    +  E ECLDPFD PECE
Sbjct: 565 PDVNRDRKFPDTMIRRVIQAYEILS-NFSRSEIIESECLDPFDNPECE 611


>ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 833

 Score =  114 bits (285), Expect = 8e-24
 Identities = 64/107 (59%), Positives = 79/107 (73%), Gaps = 4/107 (3%)
 Frame = -2

Query: 310 IYFPSPSS--FTVKCK-KSEQEDVELS-VSCAYNVLGVDNNCSFTELKAAFRARVKQFHP 143
           I FPS S+  FT  C+ ++E ED  LS    AY +LG+D  CS +ELKAAFRA+VKQFHP
Sbjct: 603 ILFPSSSTSRFTPICRQRTEGEDTLLSGPMAAYRLLGLDPTCSESELKAAFRAKVKQFHP 662

Query: 142 DVRKDAGDSDTMIRRVIQAYEMLSKNHQLFKTSERECLDPFDEPECE 2
           DV ++  DSD+MIRRVIQAYEMLS ++   +  ERECLDPF+ PECE
Sbjct: 663 DVNRNGNDSDSMIRRVIQAYEMLS-SYSRTEFIERECLDPFENPECE 708


>ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Cucumis sativus]
          Length = 838

 Score =  114 bits (285), Expect = 8e-24
 Identities = 64/107 (59%), Positives = 79/107 (73%), Gaps = 4/107 (3%)
 Frame = -2

Query: 310 IYFPSPSS--FTVKCK-KSEQEDVELS-VSCAYNVLGVDNNCSFTELKAAFRARVKQFHP 143
           I FPS S+  FT  C+ ++E ED  LS    AY +LG+D  CS +ELKAAFRA+VKQFHP
Sbjct: 608 ILFPSSSTSRFTPICRQRTEGEDTLLSGPMAAYRLLGLDPTCSESELKAAFRAKVKQFHP 667

Query: 142 DVRKDAGDSDTMIRRVIQAYEMLSKNHQLFKTSERECLDPFDEPECE 2
           DV ++  DSD+MIRRVIQAYEMLS ++   +  ERECLDPF+ PECE
Sbjct: 668 DVNRNGNDSDSMIRRVIQAYEMLS-SYSRTEFIERECLDPFENPECE 713