BLASTX nr result

ID: Cimicifuga21_contig00023788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023788
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative ...    89   4e-16
ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1...    88   8e-16
emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]    88   8e-16
ref|XP_004139965.1| PREDICTED: frataxin, mitochondrial-like [Cuc...    87   1e-15
ref|XP_002319394.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative [Ricinus communis]
           gi|223529062|gb|EEF31047.1| Frataxin, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 200

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 37/48 (77%), Positives = 45/48 (93%)
 Frame = -3

Query: 261 WLSSPVSGPSRFDWDRESQAWVYRRTKANLLQLLESEIKQLCGEPISL 118
           WLSSPVSGPSR+DWDR ++AWVYRRTKANL ++LESE++Q+CGEPI L
Sbjct: 152 WLSSPVSGPSRYDWDRNAEAWVYRRTKANLFEVLESELEQVCGEPIKL 199


>ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1 [Vitis vinifera]
           gi|296081250|emb|CBI17994.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/49 (77%), Positives = 46/49 (93%)
 Frame = -3

Query: 261 WLSSPVSGPSRFDWDRESQAWVYRRTKANLLQLLESEIKQLCGEPISLT 115
           WLSSPVSGPSRFDWD+ +QAWVYRRTKANL +LLE+E+++LCG PISL+
Sbjct: 149 WLSSPVSGPSRFDWDQSAQAWVYRRTKANLSKLLETELEKLCGTPISLS 197


>emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]
          Length = 202

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/49 (77%), Positives = 46/49 (93%)
 Frame = -3

Query: 261 WLSSPVSGPSRFDWDRESQAWVYRRTKANLLQLLESEIKQLCGEPISLT 115
           WLSSPVSGPSRFDWD+ +QAWVYRRTKANL +LLE+E+++LCG PISL+
Sbjct: 154 WLSSPVSGPSRFDWDQSAQAWVYRRTKANLSKLLETELEKLCGTPISLS 202


>ref|XP_004139965.1| PREDICTED: frataxin, mitochondrial-like [Cucumis sativus]
          Length = 191

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -3

Query: 261 WLSSPVSGPSRFDWDRESQAWVYRRTKANLLQLLESEIKQLCGEPISLT 115
           WLSSP+SGPSRFDWD+ SQ W+YRR KANLL LLE+E+ QLCGEPI L+
Sbjct: 143 WLSSPLSGPSRFDWDQNSQTWIYRRNKANLLSLLETELTQLCGEPIDLS 191


>ref|XP_002319394.1| predicted protein [Populus trichocarpa] gi|222857770|gb|EEE95317.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/48 (83%), Positives = 42/48 (87%)
 Frame = -3

Query: 261 WLSSPVSGPSRFDWDRESQAWVYRRTKANLLQLLESEIKQLCGEPISL 118
           WLSSPVSGPSRFDWDR  QAWVYRRTKANLL +LESE+ QL GEPI L
Sbjct: 144 WLSSPVSGPSRFDWDRSDQAWVYRRTKANLLNVLESEMGQLFGEPIKL 191


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