BLASTX nr result

ID: Cimicifuga21_contig00023778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023778
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596989.1| hypothetical protein MTR_2g088370 [Medicago ...    60   2e-07

>ref|XP_003596989.1| hypothetical protein MTR_2g088370 [Medicago truncatula]
           gi|355486037|gb|AES67240.1| hypothetical protein
           MTR_2g088370 [Medicago truncatula]
           gi|388492632|gb|AFK34382.1| unknown [Medicago
           truncatula]
          Length = 135

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 41/136 (30%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
 Frame = -2

Query: 492 MGNFLGSSKVILPEASLSFESVAIPLL--VKSLESSKLIDAPKRVVGFQLDDRDFNDKEH 319
           MGN +  +++    +S  +E+  I  +  +K+ +SS+  D+ K+ V F++ D +  +  +
Sbjct: 1   MGNCIRKNQI----SSAQYENEEIKKVEKMKAPKSSRREDSLKKKVRFKIQDGNKGNDGN 56

Query: 318 NKVSGVVKFRIAVTKEELTNIL--KNQKKSSRYSSVEDLLQGLKVSSRNISSV--TTDGG 151
           +  SG+++ ++ V+KEEL  +L  KN +   + +S+E+LL+ +K+  +++S V    DGG
Sbjct: 57  SSTSGIMRIKLVVSKEELKRVLSNKNIENGVKNTSLEELLKDMKLKEKSVSRVEEIDDGG 116

Query: 150 KTSQRWKLALESIAKN 103
             S  WK AL+SI ++
Sbjct: 117 LDS--WKPALDSIPED 130


Top