BLASTX nr result

ID: Cimicifuga21_contig00023777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023777
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32146.3| unnamed protein product [Vitis vinifera]              307   2e-81
ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methy...   293   3e-77
dbj|BAD68852.1| florfenicol resistance protein-like [Oryza sativ...   293   3e-77
ref|NP_001043681.1| Os01g0640800 [Oryza sativa Japonica Group] g...   293   3e-77
ref|XP_004171493.1| PREDICTED: dual-specificity RNA methyltransf...   289   4e-76

>emb|CBI32146.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  307 bits (786), Expect = 2e-81
 Identities = 148/177 (83%), Positives = 163/177 (92%)
 Frame = -2

Query: 747 LQFSPRKVTVSTSGLVPQLKRFLHESPCSLAVSLNATTDEVRNWIMPINRKYNLEVLLGT 568
           L FSPRKVTVSTSGLVPQLK FL ES C+LAVSLNATTDEVRNW+MPINRKYNL +LL T
Sbjct: 262 LHFSPRKVTVSTSGLVPQLKHFLRESNCALAVSLNATTDEVRNWVMPINRKYNLSLLLQT 321

Query: 567 IREELCTKHKYKVLFEYVMLAGINDSIDDARRLIDLVQGIPCKINLISFNPHSGSQFKPT 388
           +REEL +KH YKVLFEYVMLAG+NDS++DARRLIDLVQGIPCK+NLISFNPH GSQFKPT
Sbjct: 322 LREELRSKHNYKVLFEYVMLAGVNDSLEDARRLIDLVQGIPCKVNLISFNPHCGSQFKPT 381

Query: 387 SDEKMIEFRNFLAEAGCVVLLRPSRGDDQMAACGQLGKPGEFQAPRLRVPARFQMAV 217
           S+EK+IEFRN LAEAGC+V LRPSRGDDQMAACGQLGKPG+ QAP LRVPA+FQ A+
Sbjct: 382 SEEKIIEFRNILAEAGCIVFLRPSRGDDQMAACGQLGKPGQVQAPLLRVPAKFQSAL 438


>ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like
           [Glycine max]
          Length = 445

 Score =  293 bits (750), Expect = 3e-77
 Identities = 146/177 (82%), Positives = 157/177 (88%)
 Frame = -2

Query: 747 LQFSPRKVTVSTSGLVPQLKRFLHESPCSLAVSLNATTDEVRNWIMPINRKYNLEVLLGT 568
           LQFSPRKVT+STSGLVPQLKRFLHES C+LAVSLNATTDEVRNWIMPINRKY LE+LL T
Sbjct: 265 LQFSPRKVTISTSGLVPQLKRFLHESNCALAVSLNATTDEVRNWIMPINRKYKLELLLQT 324

Query: 567 IREELCTKHKYKVLFEYVMLAGINDSIDDARRLIDLVQGIPCKINLISFNPHSGSQFKPT 388
           +REELC K  YKVLFEYVML G+NDS  DA RLI+LV+GIPCKINLISFNPHSGS FKPT
Sbjct: 325 LREELCFKKNYKVLFEYVMLEGVNDSDGDAERLIELVKGIPCKINLISFNPHSGSFFKPT 384

Query: 387 SDEKMIEFRNFLAEAGCVVLLRPSRGDDQMAACGQLGKPGEFQAPRLRVPARFQMAV 217
            DE+MIEFRN LA AG VV+LR SRGDDQMAACGQLGKPG  QAP LRVP +FQMA+
Sbjct: 385 KDERMIEFRNTLAGAGLVVILRLSRGDDQMAACGQLGKPGTIQAPLLRVPEQFQMAI 441


>dbj|BAD68852.1| florfenicol resistance protein-like [Oryza sativa Japonica Group]
          Length = 247

 Score =  293 bits (749), Expect = 3e-77
 Identities = 141/177 (79%), Positives = 160/177 (90%)
 Frame = -2

Query: 747 LQFSPRKVTVSTSGLVPQLKRFLHESPCSLAVSLNATTDEVRNWIMPINRKYNLEVLLGT 568
           LQFSPRKVTVSTSGLVPQ+KRFL ES C+LAVSLNATTDEVRNWIMPINRKYNL +LLGT
Sbjct: 71  LQFSPRKVTVSTSGLVPQIKRFLQESNCALAVSLNATTDEVRNWIMPINRKYNLSLLLGT 130

Query: 567 IREELCTKHKYKVLFEYVMLAGINDSIDDARRLIDLVQGIPCKINLISFNPHSGSQFKPT 388
           +REE+  K KYKV FEYVMLAG+NDS+DDA+RL+DLV+GIPCKINLISFNPHSGSQFKPT
Sbjct: 131 LREEIRLKKKYKVFFEYVMLAGVNDSVDDAKRLVDLVRGIPCKINLISFNPHSGSQFKPT 190

Query: 387 SDEKMIEFRNFLAEAGCVVLLRPSRGDDQMAACGQLGKPGEFQAPRLRVPARFQMAV 217
            DEK+IEFRN L + G VV +R SRGDDQMAACGQLG+PG++Q P LRVP +FQ+A+
Sbjct: 191 PDEKIIEFRNILIQDGLVVFVRLSRGDDQMAACGQLGEPGDYQLPLLRVPEKFQVAL 247


>ref|NP_001043681.1| Os01g0640800 [Oryza sativa Japonica Group]
           gi|113533212|dbj|BAF05595.1| Os01g0640800 [Oryza sativa
           Japonica Group] gi|218188735|gb|EEC71162.1| hypothetical
           protein OsI_03021 [Oryza sativa Indica Group]
           gi|222618932|gb|EEE55064.1| hypothetical protein
           OsJ_02780 [Oryza sativa Japonica Group]
          Length = 405

 Score =  293 bits (749), Expect = 3e-77
 Identities = 141/177 (79%), Positives = 160/177 (90%)
 Frame = -2

Query: 747 LQFSPRKVTVSTSGLVPQLKRFLHESPCSLAVSLNATTDEVRNWIMPINRKYNLEVLLGT 568
           LQFSPRKVTVSTSGLVPQ+KRFL ES C+LAVSLNATTDEVRNWIMPINRKYNL +LLGT
Sbjct: 229 LQFSPRKVTVSTSGLVPQIKRFLQESNCALAVSLNATTDEVRNWIMPINRKYNLSLLLGT 288

Query: 567 IREELCTKHKYKVLFEYVMLAGINDSIDDARRLIDLVQGIPCKINLISFNPHSGSQFKPT 388
           +REE+  K KYKV FEYVMLAG+NDS+DDA+RL+DLV+GIPCKINLISFNPHSGSQFKPT
Sbjct: 289 LREEIRLKKKYKVFFEYVMLAGVNDSVDDAKRLVDLVRGIPCKINLISFNPHSGSQFKPT 348

Query: 387 SDEKMIEFRNFLAEAGCVVLLRPSRGDDQMAACGQLGKPGEFQAPRLRVPARFQMAV 217
            DEK+IEFRN L + G VV +R SRGDDQMAACGQLG+PG++Q P LRVP +FQ+A+
Sbjct: 349 PDEKIIEFRNILIQDGLVVFVRLSRGDDQMAACGQLGEPGDYQLPLLRVPEKFQVAL 405


>ref|XP_004171493.1| PREDICTED: dual-specificity RNA methyltransferase RlmN-like,
           partial [Cucumis sativus]
          Length = 205

 Score =  289 bits (740), Expect = 4e-76
 Identities = 145/177 (81%), Positives = 156/177 (88%)
 Frame = -2

Query: 747 LQFSPRKVTVSTSGLVPQLKRFLHESPCSLAVSLNATTDEVRNWIMPINRKYNLEVLLGT 568
           L FSPRKVTVSTSGLVPQLKRFL+E  C+LAVSLNATTDEVRNWIMPINRKY L +LL T
Sbjct: 25  LHFSPRKVTVSTSGLVPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQT 84

Query: 567 IREELCTKHKYKVLFEYVMLAGINDSIDDARRLIDLVQGIPCKINLISFNPHSGSQFKPT 388
           +REEL  KHKYKVLFEYVMLAG+NDSI+DA+R++DLVQGIPCKINLISFNPH GSQF+PT
Sbjct: 85  LREELRRKHKYKVLFEYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPT 144

Query: 387 SDEKMIEFRNFLAEAGCVVLLRPSRGDDQMAACGQLGKPGEFQAPRLRVPARFQMAV 217
             EKMI FRN LAEAG  V LR SRGDDQMAACGQLGKPG  QAP LRVP RFQMA+
Sbjct: 145 CKEKMIGFRNVLAEAGLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM 201


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