BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023758
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...   118   6e-25
ref|XP_002316903.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
emb|CBI21840.3| unnamed protein product [Vitis vinifera]              108   5e-22

>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/94 (57%), Positives = 73/94 (77%)
 Frame = +3

Query: 12  VKRDSLYSRISPVGDPRVSIVPLLDQWIEEGKTIKREEFKGMIKQFYKLNRFKHALEISE 191
           V +D+LY RISPVGDP +S+ PLLDQW+ EG+ ++++E + +IK+     RFKHALEIS+
Sbjct: 26  VVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISK 85

Query: 192 WMSEQRYFAPSPGDVAERMNLISKVHGIEQAEKY 293
           WMS++RYF  S  D+A RMNLI +VHG+EQ E Y
Sbjct: 86  WMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDY 119


>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 227

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/94 (57%), Positives = 73/94 (77%)
 Frame = +3

Query: 12  VKRDSLYSRISPVGDPRVSIVPLLDQWIEEGKTIKREEFKGMIKQFYKLNRFKHALEISE 191
           V +D+LY RISPVGDP +S+ PLLDQW+ EG+ ++++E + +IK+     RFKHALEIS+
Sbjct: 26  VVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISK 85

Query: 192 WMSEQRYFAPSPGDVAERMNLISKVHGIEQAEKY 293
           WMS++RYF  S  D+A RMNLI +VHG+EQ E Y
Sbjct: 86  WMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDY 119


>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/91 (61%), Positives = 73/91 (80%)
 Frame = +3

Query: 21  DSLYSRISPVGDPRVSIVPLLDQWIEEGKTIKREEFKGMIKQFYKLNRFKHALEISEWMS 200
           + LY RISPVGDP+VSIVP+LDQWIEEGK++ +++ +  IK+     R+ HALEIS WMS
Sbjct: 49  NQLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMWMS 108

Query: 201 EQRYFAPSPGDVAERMNLISKVHGIEQAEKY 293
           ++RYFA +  DVA R++L+SKV GIEQAEKY
Sbjct: 109 DKRYFALTSRDVAIRLDLMSKVLGIEQAEKY 139


>ref|XP_002316903.1| predicted protein [Populus trichocarpa] gi|222859968|gb|EEE97515.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/90 (55%), Positives = 66/90 (73%)
 Frame = +3

Query: 24  SLYSRISPVGDPRVSIVPLLDQWIEEGKTIKREEFKGMIKQFYKLNRFKHALEISEWMSE 203
           +LYSRISP+GDPR+S+ P+LDQW+EEGK +K  E + ++K   +  RFK ALE+S+WMS 
Sbjct: 1   NLYSRISPLGDPRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSS 60

Query: 204 QRYFAPSPGDVAERMNLISKVHGIEQAEKY 293
            R    SP D A R++LI KVHG+E AE Y
Sbjct: 61  NRLCNFSPSDDAVRLDLIGKVHGLESAESY 90


>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/97 (53%), Positives = 72/97 (74%)
 Frame = +3

Query: 3   TPKVKRDSLYSRISPVGDPRVSIVPLLDQWIEEGKTIKREEFKGMIKQFYKLNRFKHALE 182
           T    ++SL SRISP  D RVSIVP L+QW +EG++IK+++   +I++     R+ HALE
Sbjct: 29  TSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALE 88

Query: 183 ISEWMSEQRYFAPSPGDVAERMNLISKVHGIEQAEKY 293
           I EW+ ++ YF  SPGDVA +++LISKVHG+EQAEKY
Sbjct: 89  IYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKY 125