BLASTX nr result

ID: Cimicifuga21_contig00023754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023754
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262...   128   4e-28
ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815...   127   7e-28
ref|XP_003523658.1| PREDICTED: uncharacterized protein LOC100807...   125   4e-27
ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|22354...   124   8e-27
gb|AFK35091.1| unknown [Lotus japonicus]                              122   3e-26

>ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262753 isoform 2 [Vitis
           vinifera]
          Length = 546

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/107 (61%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
 Frame = -2

Query: 317 GKAEVQVINCKGCSRLF----PSSQTMESLHLIXXXXXSPAQLERGIGPFAGLVVCVTGL 150
           G   V+VI+ KGCSRL      S   M  L        + + + R  GPF+GLV+CVTGL
Sbjct: 7   GAGTVEVISSKGCSRLLVGISSSLPPMRGLKTFEPMSPASSSVGRSNGPFSGLVICVTGL 66

Query: 149 SKEARKQVSDATGRLGGQYSPNLHPQCTHLVVQSFGGRKFEHALKYG 9
           SKEARKQV DA  RLGGQYSPNLHPQCTHLVVQSFGGRK +HALK+G
Sbjct: 67  SKEARKQVMDAAERLGGQYSPNLHPQCTHLVVQSFGGRKLDHALKHG 113


>ref|XP_003527763.1| PREDICTED: uncharacterized protein LOC100815253 [Glycine max]
          Length = 541

 Score =  127 bits (320), Expect = 7e-28
 Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 9/114 (7%)
 Frame = -2

Query: 317 GKAEVQVINCKGCSRLFPSS-------QTMESLHLIXXXXXSPAQLERGIGPFAGLVVCV 159
           G   V+V++ KGCSRLF SS       Q +E +        SP Q+     PFAGLV+CV
Sbjct: 3   GDGRVEVVSGKGCSRLFSSSIPSFRGLQPLEPMS----PASSPLQVPSSTAPFAGLVICV 58

Query: 158 TGLSKEARKQVSDATGRLGGQYSPNLHPQCTHLVVQ--SFGGRKFEHALKYGLR 3
           TGLSKEAR QV +AT RLGGQYSPNLHPQCTHLVVQ  SFGGRKFEHALK+G +
Sbjct: 59  TGLSKEARNQVMEATERLGGQYSPNLHPQCTHLVVQIYSFGGRKFEHALKHGAK 112


>ref|XP_003523658.1| PREDICTED: uncharacterized protein LOC100807358 [Glycine max]
          Length = 542

 Score =  125 bits (314), Expect = 4e-27
 Identities = 69/115 (60%), Positives = 80/115 (69%), Gaps = 10/115 (8%)
 Frame = -2

Query: 317 GKAEVQVINCKGCSRLFPSS-------QTMESLHLIXXXXXSPAQLERGIGPFAGLVVCV 159
           G   V+V++ KGCSRLF SS       Q +E +        SP Q+     PFAGLV+CV
Sbjct: 3   GDGRVEVVSGKGCSRLFSSSLPSFRGLQPLEPMS----PASSPLQVPSSTTPFAGLVICV 58

Query: 158 TGLSKEARKQVSDATGRLGGQYSPNLHPQCTHLVVQ---SFGGRKFEHALKYGLR 3
           TGLSKEAR QV +AT RLGGQYSPNLHP+CTHLVVQ   SFGGRKFEHALK+G +
Sbjct: 59  TGLSKEARNQVMEATDRLGGQYSPNLHPRCTHLVVQISFSFGGRKFEHALKHGAK 113


>ref|XP_002516161.1| topbp1, putative [Ricinus communis] gi|223544647|gb|EEF46163.1|
           topbp1, putative [Ricinus communis]
          Length = 556

 Score =  124 bits (311), Expect = 8e-27
 Identities = 70/116 (60%), Positives = 80/116 (68%), Gaps = 13/116 (11%)
 Frame = -2

Query: 317 GKAEVQVINCKGCSRLF-------PSS---QTMESLHLIXXXXXSPAQLERGIGPFAGLV 168
           G  +V+VIN KGCSRLF       PS    Q+ E +        S A L R  GPF+GLV
Sbjct: 10  GLGKVEVINSKGCSRLFVGLSSSIPSFRGLQSFEPMSPTTASIGSEAVLVRSTGPFSGLV 69

Query: 167 VCVTGLSKEARKQVSDATGRLGGQYSPNLHPQCTHLVVQ---SFGGRKFEHALKYG 9
           +CVTGLS+EARKQV +AT RLGG+YSPNLHP CTHLVVQ    FGGRKFEHALK+G
Sbjct: 70  ICVTGLSREARKQVMEATERLGGRYSPNLHPHCTHLVVQISFYFGGRKFEHALKHG 125


>gb|AFK35091.1| unknown [Lotus japonicus]
          Length = 529

 Score =  122 bits (306), Expect = 3e-26
 Identities = 67/109 (61%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
 Frame = -2

Query: 317 GKAEVQVINCKGCSRLFPSS----QTMESLHLIXXXXXSPAQLERGIGPFAGLVVCVTGL 150
           G   V+V+  KGCSRLF SS    Q ME +        S +   R   PFAGLV+CVTGL
Sbjct: 3   GDGIVEVVGGKGCSRLFSSSFRGLQPMEPVS-----PASSSSRVRSSAPFAGLVICVTGL 57

Query: 149 SKEARKQVSDATGRLGGQYSPNLHPQCTHLVVQSFGGRKFEHALKYGLR 3
           SKE R QV +AT RLGGQYS NLHPQCTHLVVQSFGGRK EHALK+G +
Sbjct: 58  SKETRNQVREATERLGGQYSSNLHPQCTHLVVQSFGGRKLEHALKHGAK 106


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