BLASTX nr result

ID: Cimicifuga21_contig00023745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023745
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...   167   6e-40
emb|CBI24193.3| unnamed protein product [Vitis vinifera]              167   6e-40
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]   167   6e-40
ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34

>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  167 bits (424), Expect = 6e-40
 Identities = 77/101 (76%), Positives = 91/101 (90%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    GEMDEVLQMLPTPSNRSRLSWNVLISGFSRHGYFKKARDTFHQMLQIGPRPDHVTFVSLL 182
            GEM +VL+MLP P NRSRLSWN+LIS F+RHG F+KAR+TFH+ML++GP+PDHVTFVSLL
Sbjct: 1401 GEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLL 1460

Query: 183  SACNHAGLAEEGLAYFASM-KEFGVQPGIEHCVCIVDLLGR 302
            SACNH GL +EGLAY+ SM +EFGV PGIEHCVCI+DLLGR
Sbjct: 1461 SACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGR 1501



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   GEMDEVLQMLPTPSNRSRLSWNVLISGFSRHGYFKKARDTFHQMLQIGPRPDHVTFVSLL 182
           GE+++  +       ++ +SW  LISG+++HGY   A   + +M   G +P+ VTF+SLL
Sbjct: 383 GEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLL 442

Query: 183 SACNHAGLAEEGLAYFASM-KEFGVQPGIEHCVCIVDLLGR 302
            AC+H GL  EG   F +M  ++ ++P  EH  C+VDL  R
Sbjct: 443 FACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFAR 483


>emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  167 bits (424), Expect = 6e-40
 Identities = 77/101 (76%), Positives = 91/101 (90%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    GEMDEVLQMLPTPSNRSRLSWNVLISGFSRHGYFKKARDTFHQMLQIGPRPDHVTFVSLL 182
            GEM +VL+MLP P NRSRLSWN+LIS F+RHG F+KAR+TFH+ML++GP+PDHVTFVSLL
Sbjct: 760  GEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLL 819

Query: 183  SACNHAGLAEEGLAYFASM-KEFGVQPGIEHCVCIVDLLGR 302
            SACNH GL +EGLAY+ SM +EFGV PGIEHCVCI+DLLGR
Sbjct: 820  SACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGR 860


>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  167 bits (424), Expect = 6e-40
 Identities = 77/101 (76%), Positives = 91/101 (90%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3    GEMDEVLQMLPTPSNRSRLSWNVLISGFSRHGYFKKARDTFHQMLQIGPRPDHVTFVSLL 182
            GEM +VL+MLP P NRSRLSWN+LIS F+RHG F+KAR+TFH+ML++GP+PDHVTFVSLL
Sbjct: 751  GEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLL 810

Query: 183  SACNHAGLAEEGLAYFASM-KEFGVQPGIEHCVCIVDLLGR 302
            SACNH GL +EGLAY+ SM +EFGV PGIEHCVCI+DLLGR
Sbjct: 811  SACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGR 851


>ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|222853577|gb|EEE91124.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score =  153 bits (386), Expect = 2e-35
 Identities = 68/101 (67%), Positives = 87/101 (86%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   GEMDEVLQMLPTPSNRSRLSWNVLISGFSRHGYFKKARDTFHQMLQIGPRPDHVTFVSLL 182
           GE+D+VL+++P P NRSRLSWN+L S FSRHG+F+KA++TFH+M+ +G +PDHVTFVSLL
Sbjct: 585 GEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLL 644

Query: 183 SACNHAGLAEEGLAYFASM-KEFGVQPGIEHCVCIVDLLGR 302
           SAC+H G+ EEGLAY+ SM KEFG+   I HCVCI+DLLGR
Sbjct: 645 SACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGR 685


>ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/101 (66%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   GEMDEVLQMLPTPSNRSRLSWNVLISGFSRHGYFKKARDTFHQMLQIGPRPDHVTFVSLL 182
           GE+D+V ++LP P +RS+ SWN+LIS  +RHG+F++AR+ FH+ML +G RPDHVTFVSLL
Sbjct: 611 GEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLL 670

Query: 183 SACNHAGLAEEGLAYFASMK-EFGVQPGIEHCVCIVDLLGR 302
           SAC+H GL +EGLAYF+SM  +FGV  GIEHCVCI+DLLGR
Sbjct: 671 SACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGR 711


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