BLASTX nr result
ID: Cimicifuga21_contig00023713
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00023713 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002531155.1| conserved hypothetical protein [Ricinus comm... 76 3e-12 emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera] 70 1e-10 ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|2... 69 4e-10 ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cuc... 63 2e-08 ref|XP_002869050.1| predicted protein [Arabidopsis lyrata subsp.... 62 6e-08 >ref|XP_002531155.1| conserved hypothetical protein [Ricinus communis] gi|223529268|gb|EEF31240.1| conserved hypothetical protein [Ricinus communis] Length = 269 Score = 75.9 bits (185), Expect = 3e-12 Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 7/88 (7%) Frame = -1 Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78 MGKV PKE+ + +++ R S+ YLKPGALAQLRY++A+ T CTDLGKKRV VL Sbjct: 1 MGKVSPKERDSRTPKQKRRLRSSSSRYLKPGALAQLRYNKAS-TATKSCTDLGKKRVAVL 59 Query: 77 DSTNAKGD-------AVLDQSPTSILSP 15 + A+GD +V+D+SP +LSP Sbjct: 60 TNKKAEGDDIMIENNSVIDKSPL-MLSP 86 >emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera] Length = 463 Score = 70.5 bits (171), Expect = 1e-10 Identities = 36/71 (50%), Positives = 48/71 (67%) Frame = -1 Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78 MGKV PKE+ +K +++ R+ ++ +YL+PGALAQLRYS+A CTDL KK+V VL Sbjct: 191 MGKVSPKERGMKTPKQKRRQRNSSNKYLRPGALAQLRYSKAATKS---CTDLVKKQVAVL 247 Query: 77 DSTNAKGDAVL 45 DS A D L Sbjct: 248 DSKKADSDIAL 258 >ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|222836730|gb|EEE75123.1| predicted protein [Populus trichocarpa] Length = 288 Score = 68.9 bits (167), Expect = 4e-10 Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 7/88 (7%) Frame = -1 Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78 MGKV PK+ LK +++ R S+ YLKPGALAQL+YS+A+ K CTDLGKKRV V Sbjct: 1 MGKVSPKDGNLKTPKQKRRLRSSSSRYLKPGALAQLQYSKASAAKS--CTDLGKKRVAVF 58 Query: 77 -------DSTNAKGDAVLDQSPTSILSP 15 D D +D+SP +LSP Sbjct: 59 GNKKVGDDDELVVEDRAMDKSPL-LLSP 85 >ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus] gi|449524671|ref|XP_004169345.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus] Length = 266 Score = 63.2 bits (152), Expect = 2e-08 Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 5/86 (5%) Frame = -1 Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78 MGKV ++ KK +++ R + +YLKPGALA+LR S+ + K CTDLG+KRV VL Sbjct: 1 MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKS--CTDLGRKRVAVL 58 Query: 77 DSTNAKGDAVL-----DQSPTSILSP 15 D+ K + VL D+SP +LSP Sbjct: 59 DAGKTKRNVVLEDKVSDRSPL-MLSP 83 >ref|XP_002869050.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297314886|gb|EFH45309.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 301 Score = 61.6 bits (148), Expect = 6e-08 Identities = 35/81 (43%), Positives = 48/81 (59%) Frame = -1 Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78 MGKV PK+ K S ++ + + +YLKPGAL QL YS+A+ K C DLGKKRV V Sbjct: 1 MGKVSPKDLDSKTSVRKKKLKGSGNKYLKPGALVQLCYSKASAAKS--CNDLGKKRVPVF 58 Query: 77 DSTNAKGDAVLDQSPTSILSP 15 D+ +A+ + + S SP Sbjct: 59 DTKHARNKKMAAEHLNSPKSP 79