BLASTX nr result

ID: Cimicifuga21_contig00023713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00023713
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531155.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]    70   1e-10
ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cuc...    63   2e-08
ref|XP_002869050.1| predicted protein [Arabidopsis lyrata subsp....    62   6e-08

>ref|XP_002531155.1| conserved hypothetical protein [Ricinus communis]
           gi|223529268|gb|EEF31240.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 7/88 (7%)
 Frame = -1

Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78
           MGKV PKE+  +  +++ R  S+   YLKPGALAQLRY++A+ T    CTDLGKKRV VL
Sbjct: 1   MGKVSPKERDSRTPKQKRRLRSSSSRYLKPGALAQLRYNKAS-TATKSCTDLGKKRVAVL 59

Query: 77  DSTNAKGD-------AVLDQSPTSILSP 15
            +  A+GD       +V+D+SP  +LSP
Sbjct: 60  TNKKAEGDDIMIENNSVIDKSPL-MLSP 86


>emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]
          Length = 463

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = -1

Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78
           MGKV PKE+ +K  +++ R+ ++  +YL+PGALAQLRYS+A       CTDL KK+V VL
Sbjct: 191 MGKVSPKERGMKTPKQKRRQRNSSNKYLRPGALAQLRYSKAATKS---CTDLVKKQVAVL 247

Query: 77  DSTNAKGDAVL 45
           DS  A  D  L
Sbjct: 248 DSKKADSDIAL 258


>ref|XP_002327645.1| predicted protein [Populus trichocarpa] gi|222836730|gb|EEE75123.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
 Frame = -1

Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78
           MGKV PK+  LK  +++ R  S+   YLKPGALAQL+YS+A+  K   CTDLGKKRV V 
Sbjct: 1   MGKVSPKDGNLKTPKQKRRLRSSSSRYLKPGALAQLQYSKASAAKS--CTDLGKKRVAVF 58

Query: 77  -------DSTNAKGDAVLDQSPTSILSP 15
                  D      D  +D+SP  +LSP
Sbjct: 59  GNKKVGDDDELVVEDRAMDKSPL-LLSP 85


>ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus]
           gi|449524671|ref|XP_004169345.1| PREDICTED: F-box
           protein At4g35930-like [Cucumis sativus]
          Length = 266

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
 Frame = -1

Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78
           MGKV   ++  KK +++ R   +  +YLKPGALA+LR S+ +  K   CTDLG+KRV VL
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKS--CTDLGRKRVAVL 58

Query: 77  DSTNAKGDAVL-----DQSPTSILSP 15
           D+   K + VL     D+SP  +LSP
Sbjct: 59  DAGKTKRNVVLEDKVSDRSPL-MLSP 83


>ref|XP_002869050.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314886|gb|EFH45309.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 301

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/81 (43%), Positives = 48/81 (59%)
 Frame = -1

Query: 257 MGKVCPKEKALKKSRKQNRRLSARKEYLKPGALAQLRYSRATCTKPSYCTDLGKKRVVVL 78
           MGKV PK+   K S ++ +   +  +YLKPGAL QL YS+A+  K   C DLGKKRV V 
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKGSGNKYLKPGALVQLCYSKASAAKS--CNDLGKKRVPVF 58

Query: 77  DSTNAKGDAVLDQSPTSILSP 15
           D+ +A+   +  +   S  SP
Sbjct: 59  DTKHARNKKMAAEHLNSPKSP 79


Top